Rare Events Sampling Methods for Quantum and Classical Ab Initio Molecular Dynamics

被引:1
作者
Iyengar, Srinivasan S. [4 ,5 ]
Schlegel, H. Bernhard [1 ]
Sumner, Isaiah [2 ]
Li, Junjie [3 ]
机构
[1] Wayne State Univ, Dept Chem, Detroit, MI 48202 USA
[2] James Madison Univ, Dept Chem & Biochem, Harrisonburg, VA 22807 USA
[3] Univ Texas Austin, Texas Adv Comp Ctr, Austin, TX 78758 USA
[4] Indiana Univ, Dept Chem, Dept Phys, Bloomington, IN 47405 USA
[5] Indiana Univ, Indiana Univ Quantum Sci & Engn Ctr IU QSEC, Bloomington, IN 47405 USA
基金
美国国家科学基金会;
关键词
MATRIX PROPAGATION ADMP; SOYBEAN LIPOXYGENASE-1 SLO-1; DENSITY-MATRIX; FREE-ENERGY; BORN-OPPENHEIMER; GAUSSIAN-ORBITALS; ACTIVE-SITE; NONEQUILIBRIUM MEASUREMENTS; HYDROGEN-TRANSFER; PHASE-SPACE;
D O I
10.1021/acs.jpca.3c07385
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We provide an approach to sample rare events during classical ab initio molecular dynamics and quantum wavepacket dynamics. For classical AIMD, a set of fictitious degrees of freedom are introduced that may harmonically interact with the electronic and nuclear degrees of freedom to steer the dynamics in a conservative fashion toward energetically forbidden regions. A similar approach when introduced for quantum wavepacket dynamics has the effect of biasing the trajectory of the wavepacket centroid toward the regions of the potential surface that are difficult to sample. The approach is demonstrated for a phenol-amine system, which is a prototypical problem for condensed phase-proton transfer, and for model potentials undergoing wavepacket dynamics. In all cases, the approach yields trajectories that conserve energy while sampling rare events.
引用
收藏
页码:5386 / 5397
页数:12
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