In Silico Analysis of the ROP29 Protein as a Vaccine Candidate Against Toxoplasma gondii

被引:2
作者
Karimipour-Saryazdi, Amir [1 ]
Ghaffarifar, Fatemeh [1 ]
Dalimi, Abdolhossein [1 ]
Foroutan, Masoud [2 ]
Horton, John [3 ]
Sadraei, Javid [1 ]
机构
[1] Tarbiat Modares Univ, Fac Med Sci, Dept Parasitol, Tehran, Iran
[2] Abadan Univ Med Sci, Fac Med, Dept Basic Med Sci, Abadan, Iran
[3] Trop Projects, Hitchin, England
基金
美国国家科学基金会;
关键词
bioinformatic analysis; ROP29; Toxoplasma gondii; vaccine; B-CELL EPITOPES; BIOINFORMATICS ANALYSIS; DNA VACCINE; PREDICTION; IDENTIFICATION; ANTIGENICITY; EXPRESSION; RESISTANCE; INFECTION; RHOPTRIES;
D O I
10.1155/2024/1918202
中图分类号
R38 [医学寄生虫学]; Q [生物科学];
学科分类号
07 ; 0710 ; 09 ; 100103 ;
摘要
The progression of Toxoplasma gondii (T. gondii) invasion is aided by rhoptry proteins (ROPs), which are also crucial for the parasite's survival in host cells. In this study, in silico analysis was performed to examine the various aspects of the ROP29 protein, such as physicochemical properties, potential T- and B-cell epitopes, and other significant features. The research revealed that there were 55 possible sites for posttranslational modification in the ROP29 protein. The secondary structure of the ROP29 protein consists of a random coil, an alpha-helix, and an extended strand, which account for 49.69%, 36.81%, and 13.50%, respectively. Moreover, a number of putative T- and B-cell epitopes for ROP29 were found. The Ramachandran plot showed that 88.91% (crude model) and 97.54% (refine model) of the amino acid residues were located in the favored regions. Also, the testing of this protein's antigenicity and allergenicity showed that it was nonallergenic and immunogenic. Our results suggested that employing in silico tools to apply structural and functional predictions to the ROP29 protein can lower the likelihood that laboratory investigations will fail. This research served as a crucial foundation for further research. More research is required in the future in suitable animal model employing ROP29 alone or in combination with other antigens.
引用
收藏
页数:17
相关论文
共 75 条
[1]   Human toxoplasmosis-Searching for novel chemotherapeutics [J].
Antczak, Magdalena ;
Dzitko, Katarzyna ;
Dlugonska, Henryka .
BIOMEDICINE & PHARMACOTHERAPY, 2016, 82 :677-684
[2]   Investigating the Determinants of Toxoplasma gondii Prevalence in Meat: A Systematic Review and Meta-Regression [J].
Belluco, Simone ;
Mancin, Marzia ;
Conficoni, Daniele ;
Simonato, Giulia ;
Pietrobelli, Mario ;
Ricci, Antonia .
PLOS ONE, 2016, 11 (04)
[3]  
Berzofsky Jay A., 1993, P235
[4]   Prediction of CTL epitopes using QM, SVM and ANN techniques [J].
Bhasin, M ;
Raghava, GPS .
VACCINE, 2004, 22 (23-24) :3195-3204
[5]   Kiss and spit:: the dual roles of Toxoplasma rhoptries [J].
Boothroyd, John C. ;
Dubremetz, Jean-Francois .
NATURE REVIEWS MICROBIOLOGY, 2008, 6 (01) :79-88
[6]   Rhoptries: an arsenal of secreted virulence factors [J].
Bradley, Peter J. ;
Sibley, L. David .
CURRENT OPINION IN MICROBIOLOGY, 2007, 10 (06) :582-587
[7]   The Toxoplasma gondii rhoptry protein ROP4 is secreted into the parasitophorous vacuole and becomes phosphorylated in infected cells [J].
Carey, KL ;
Jongco, AM ;
Kam, K ;
Ward, GE .
EUKARYOTIC CELL, 2004, 3 (05) :1320-1330
[8]   Geographical distribution of Toxoplasma gondii genotypes in Asia: A link with neighboring continents [J].
Chaichan, P. ;
Mercier, A. ;
Galal, L. ;
Mahittikorn, A. ;
Ariey, F. ;
Morand, S. ;
Boumediene, F. ;
Udonsom, R. ;
Hamidovic, A. ;
Murat, J. B. ;
Sukthana, Y. ;
Darde, M. L. .
INFECTION GENETICS AND EVOLUTION, 2017, 53 :227-238
[9]  
Chou P Y, 1978, Adv Enzymol Relat Areas Mol Biol, V47, P45
[10]  
Coppens I, 2001, Expert Rev Mol Med, V2001, P1, DOI 10.1017/S1462399401002277