High-throughput identification of repurposable neuroactive drugs with potent anti-glioblastoma activity

被引:6
作者
Lee, Sohyon [1 ]
Weiss, Tobias [2 ,3 ]
Buehler, Marcel [2 ]
Mena, Julien [1 ]
Lottenbach, Zuzanna [1 ]
Wegmann, Rebekka [1 ]
Sun, Miaomiao [2 ,3 ]
Bihl, Michel [4 ]
Augustynek, Bartlomiej [5 ,6 ,7 ]
Baumann, Sven P. [5 ,6 ]
Goetze, Sandra [8 ,9 ,10 ]
van Drogen, Audrey [8 ,9 ,10 ]
Pedrioli, Patrick G. A. [8 ,9 ,10 ]
Penton, David [11 ]
Festl, Yasmin [1 ]
Buck, Alicia [1 ,2 ,3 ]
Kirschenbaum, Daniel [3 ,12 ]
Zeitlberger, Anna M. [13 ]
Neidert, Marian C. [13 ]
Vasella, Flavio [3 ,14 ]
Rushing, Elisabeth J. [3 ,12 ]
Wollscheid, Bernd [8 ,9 ,10 ]
Hediger, Matthias A. [5 ,6 ]
Weller, Michael [2 ,3 ,15 ]
Snijder, Berend [1 ,9 ,15 ]
机构
[1] Swiss Fed Inst Technol, Inst Mol Syst Biol, Dept Biol, Zurich, Switzerland
[2] Univ Hosp Zurich, Dept Neurol, Clin Neurosci Ctr, Zurich, Switzerland
[3] Univ Zurich, Zurich, Switzerland
[4] Univ Zurich Hosp, Inst Pathol, Zurich, Switzerland
[5] Univ Bern, Inselspital, Dept Nephrol & Hypertens, Membrane Transport Discovery Lab, Bern, Switzerland
[6] Univ Bern, Inselspital, Dept Biomed Res, Bern, Switzerland
[7] Univ Bern, Inst Biochem & Mol Med, Bern, Switzerland
[8] Swiss Fed Inst Technol, Inst Translat Med ITM, Dept Hlth Sci & Technol, CH-8092 Zurich, Switzerland
[9] Swiss Inst Bioinformat, Lausanne, Switzerland
[10] ETH PHRT Swiss Multiom Ctr SMOC, Zurich, Switzerland
[11] Univ Zurich, Electrophysiol Facil, Zurich, Switzerland
[12] Univ Hosp Zurich, Dept Neuropathol, Zurich, Switzerland
[13] Cantonal Hosp St Gallen, Dept Neurosurg, St Gallen, Switzerland
[14] Univ Hosp, Clin Neurosci Ctr, Dept Neurol, Zurich, Switzerland
[15] Univ Hosp Zurich, Comprehens Canc Ctr Zurich, Zurich, Switzerland
基金
欧洲研究理事会; 瑞士国家科学基金会;
关键词
D O I
10.1038/s41591-024-03224-y
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Glioblastoma, the most aggressive primary brain cancer, has a dismal prognosis, yet systemic treatment is limited to DNA-alkylating chemotherapies. New therapeutic strategies may emerge from exploring neurodevelopmental and neurophysiological vulnerabilities of glioblastoma. To this end, we systematically screened repurposable neuroactive drugs in glioblastoma patient surgery material using a clinically concordant and single-cell resolved platform. Profiling more than 2,500 ex vivo drug responses across 27 patients and 132 drugs identified class-diverse neuroactive drugs with potent anti-glioblastoma efficacy that were validated across model systems. Interpretable molecular machine learning of drug-target networks revealed neuroactive convergence on AP-1/BTG-driven glioblastoma suppression, enabling expanded in silico screening of more than 1 million compounds with high patient validation accuracy. Deep multimodal profiling confirmed Ca2+-driven AP-1/BTG-pathway induction as a neuro-oncological glioblastoma vulnerability, epitomized by the anti-depressant vortioxetine synergizing with current standard-of-care chemotherapies in vivo. These findings establish an actionable framework for glioblastoma treatment rooted in its neural etiology. A single-cell ex vivo screening of repurposable drugs in glioblastoma and machine learning of drug-target networks show that anti-tumor neuroactive drugs converge on the AP-1/BTG pathway, based on which prediction models and experimental in vivo and in silico validation identify the anti-depressant vortioxetine as a potential therapeutic agent.
引用
收藏
页码:3196 / 3208
页数:43
相关论文
共 80 条
  • [1] Glioma stem cells promote radioresistance by preferential activation of the DNA damage response
    Bao, Shideng
    Wu, Qiulian
    McLendon, Roger E.
    Hao, Yueling
    Shi, Qing
    Hjelmeland, Anita B.
    Dewhirst, Mark W.
    Bigner, Darell D.
    Rich, Jeremy N.
    [J]. NATURE, 2006, 444 (7120) : 756 - 760
  • [2] Targeting glioblastoma signaling and metabolism with a re-purposed brain-penetrant drug
    Bi, Junfeng
    Khan, Atif
    Tang, Jun
    Armando, Aaron M.
    Wu, Sihan
    Zhang, Wei
    Gimple, Ryan C.
    Reed, Alex
    Jing, Hui
    Koga, Tomoyuki
    Wong, Ivy Tsz-Lo
    Gu, Yuchao
    Miki, Shunichiro
    Yang, Huijun
    Prager, Briana
    Curtis, Ellis J.
    Wainwright, Derek A.
    Furnari, Frank B.
    Rich, Jeremy N.
    Cloughesy, Timothy F.
    Kornblum, Harley I.
    Quehenberger, Oswald
    Rzhetsky, Andrey
    Cravatt, Benjamin F.
    Mischel, Paul S.
    [J]. CELL REPORTS, 2021, 37 (05):
  • [3] The Somatic Genomic Landscape of Glioblastoma
    Brennan, Cameron W.
    Verhaak, Roel G. W.
    McKenna, Aaron
    Campos, Benito
    Noushmehr, Houtan
    Salama, Sofie R.
    Zheng, Siyuan
    Chakravarty, Debyani
    Sanborn, J. Zachary
    Berman, Samuel H.
    Beroukhim, Rameen
    Bernard, Brady
    Wu, Chang-Jiun
    Genovese, Giannicola
    Shmulevich, Ilya
    Barnholtz-Sloan, Jill
    Zou, Lihua
    Vegesna, Rahulsimham
    Shukla, Sachet A.
    Ciriello, Giovanni
    Yung, W. K.
    Zhang, Wei
    Sougnez, Carrie
    Mikkelsen, Tom
    Aldape, Kenneth
    Bigner, Darell D.
    Van Meir, Erwin G.
    Prados, Michael
    Sloan, Andrew
    Black, Keith L.
    Eschbacher, Jennifer
    Finocchiaro, Gaetano
    Friedman, William
    Andrews, David W.
    Guha, Abhijit
    Iacocca, Mary
    O'Neill, Brian P.
    Foltz, Greg
    Myers, Jerome
    Weisenberger, Daniel J.
    Penny, Robert
    Kucherlapati, Raju
    Perou, Charles M.
    Hayes, D. Neil
    Gibbs, Richard
    Marra, Marco
    Mills, Gordon B.
    Lander, Eric
    Spellman, Paul
    Wilson, Richard
    [J]. CELL, 2013, 155 (02) : 462 - 477
  • [4] Activation of Dopamine Receptor 2 Prompts Transcriptomic and Metabolic Plasticity in Glioblastoma
    Caragher, Seamus P.
    Shireman, Jack M.
    Huang, Mei
    Miska, Jason
    Atashi, Fatemeh
    Baisiwala, Shivani
    Park, Cheol Hong
    Saathoff, Miranda R.
    Warnke, Louisa
    Xiao, Ting
    Lesniak, Maciej S.
    James, C. David
    Meltzer, Herbert
    Tryba, Andrew K.
    Ahmed, Atique U.
    [J]. JOURNAL OF NEUROSCIENCE, 2019, 39 (11) : 1982 - 1993
  • [5] Monoamines in glioblastoma: complex biology with therapeutic potential
    Caragher, Seamus Patrick
    Hall, Robert Raymond
    Ahsan, Riasat
    Ahmed, Atique U.
    [J]. NEURO-ONCOLOGY, 2018, 20 (08) : 1014 - 1025
  • [6] Forkhead transcription factors: Key players in development and metabolism
    Carlsson, P
    Mahlapuu, M
    [J]. DEVELOPMENTAL BIOLOGY, 2002, 250 (01) : 1 - 23
  • [7] A restricted cell population propagates glioblastoma growth after chemotherapy
    Chen, Jian
    Li, Yanjiao
    Yu, Tzong-Shiue
    McKay, Renee M.
    Burns, Dennis K.
    Kernie, Steven G.
    Parada, Luis F.
    [J]. NATURE, 2012, 488 (7412) : 522 - +
  • [8] Comprehensive genomic characterization defines human glioblastoma genes and core pathways
    Chin, L.
    Meyerson, M.
    Aldape, K.
    Bigner, D.
    Mikkelsen, T.
    VandenBerg, S.
    Kahn, A.
    Penny, R.
    Ferguson, M. L.
    Gerhard, D. S.
    Getz, G.
    Brennan, C.
    Taylor, B. S.
    Winckler, W.
    Park, P.
    Ladanyi, M.
    Hoadley, K. A.
    Verhaak, R. G. W.
    Hayes, D. N.
    Spellman, Paul T.
    Absher, D.
    Weir, B. A.
    Ding, L.
    Wheeler, D.
    Lawrence, M. S.
    Cibulskis, K.
    Mardis, E.
    Zhang, Jinghui
    Wilson, R. K.
    Donehower, L.
    Wheeler, D. A.
    Purdom, E.
    Wallis, J.
    Laird, P. W.
    Herman, J. G.
    Schuebel, K. E.
    Weisenberger, D. J.
    Baylin, S. B.
    Schultz, N.
    Yao, Jun
    Wiedemeyer, R.
    Weinstein, J.
    Sander, C.
    Gibbs, R. A.
    Gray, J.
    Kucherlapati, R.
    Lander, E. S.
    Myers, R. M.
    Perou, C. M.
    McLendon, Roger
    [J]. NATURE, 2008, 455 (7216) : 1061 - 1068
  • [9] Single-cell RNA-seq reveals that glioblastoma recapitulates a normal neurodevelopmental hierarchy
    Couturier, Charles P.
    Ayyadhury, Shamini
    Le, Phuong U.
    Nadaf, Javad
    Monlong, Jean
    Riva, Gabriele
    Allache, Redouane
    Baig, Salma
    Yan, Xiaohua
    Bourgey, Mathieu
    Lee, Changseok
    Wang, Yu Chang David
    Yong, V. Wee
    Guiot, Marie-Christine
    Najafabadi, Hamed
    Misic, Bratislav
    Antel, Jack
    Bourque, Guillaume
    Ragoussis, Jiannis
    Petrecca, Kevin
    [J]. NATURE COMMUNICATIONS, 2020, 11 (01)
  • [10] The ATF6 pathway of the ER stress response contributes to enhanced viability in glioblastoma
    Dadey, David Y. A.
    Kapoor, Vaishali
    Khudanyan, Arpine
    Urano, Fumihiko
    Kim, Albert H.
    Thotala, Dinesh
    Hallahan, Dennis E.
    [J]. ONCOTARGET, 2016, 7 (02) : 2080 - 2092