The Evolutionary Interplay of Somatic and Germline Mutation Rates
被引:2
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作者:
Beichman, Annabel C.
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机构:
Univ Washington, Dept Genome Sci, Seattle, WA 98195 USAUniv Washington, Dept Genome Sci, Seattle, WA 98195 USA
Beichman, Annabel C.
[1
]
Zhu, Luke
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机构:
Univ Washington, Dept Bioengn, Seattle, WA USAUniv Washington, Dept Genome Sci, Seattle, WA 98195 USA
Zhu, Luke
[2
]
Harris, Kelley
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机构:
Univ Washington, Dept Genome Sci, Seattle, WA 98195 USA
Fred Hutchinson Canc Ctr, Computat Biol Div, Seattle, WA 98109 USAUniv Washington, Dept Genome Sci, Seattle, WA 98195 USA
Harris, Kelley
[1
,3
]
机构:
[1] Univ Washington, Dept Genome Sci, Seattle, WA 98195 USA
[2] Univ Washington, Dept Bioengn, Seattle, WA USA
[3] Fred Hutchinson Canc Ctr, Computat Biol Div, Seattle, WA 98109 USA
来源:
ANNUAL REVIEW OF BIOMEDICAL DATA SCIENCE
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2024年
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7卷
Novel sequencing technologies are making it increasingly possible to measure the mutation rates of somatic cell lineages. Accurate germline mutation rate measurement technologies have also been available for a decade, making it possible to assess how this fundamental evolutionary parameter varies across the tree of life. Here, we review some classical theories about germline and somatic mutation rate evolution that were formulated using principles of population genetics and the biology of aging and cancer. We find that somatic mutation rate measurements, while still limited in phylogenetic diversity, seem consistent with the theory that selection to preserve the soma is proportional to life span. However, germline and somatic theories make conflicting predictions regarding which species should have the most accurate DNA repair. Resolving this conflict will require carefully measuring how mutation rates scale with time and cell division and achieving a better understanding of mutation rate pleiotropy among cell types.
机构:
Albert Einstein Coll Med, Dept Genet, 1301 Morris Pk Ave, Bronx, NY 10461 USAAlbert Einstein Coll Med, Dept Genet, 1301 Morris Pk Ave, Bronx, NY 10461 USA
Milholland, Brandon
Dong, Xiao
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机构:
Albert Einstein Coll Med, Dept Genet, 1301 Morris Pk Ave, Bronx, NY 10461 USAAlbert Einstein Coll Med, Dept Genet, 1301 Morris Pk Ave, Bronx, NY 10461 USA
Dong, Xiao
Zhang, Lei
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机构:
Albert Einstein Coll Med, Dept Genet, 1301 Morris Pk Ave, Bronx, NY 10461 USAAlbert Einstein Coll Med, Dept Genet, 1301 Morris Pk Ave, Bronx, NY 10461 USA
Zhang, Lei
Hao, Xiaoxiao
论文数: 0引用数: 0
h-index: 0
机构:
Albert Einstein Coll Med, Dept Genet, 1301 Morris Pk Ave, Bronx, NY 10461 USAAlbert Einstein Coll Med, Dept Genet, 1301 Morris Pk Ave, Bronx, NY 10461 USA
Hao, Xiaoxiao
Suh, Yousin
论文数: 0引用数: 0
h-index: 0
机构:
Albert Einstein Coll Med, Dept Genet, 1301 Morris Pk Ave, Bronx, NY 10461 USA
Albert Einstein Coll Med, Dept Ophthalmol & Visual Sci, 1301 Morris Pk Ave, Bronx, NY 10461 USA
Albert Einstein Coll Med, Dept Med, 1301 Morris Pk Ave, Bronx, NY 10461 USAAlbert Einstein Coll Med, Dept Genet, 1301 Morris Pk Ave, Bronx, NY 10461 USA
Suh, Yousin
Vijg, Jan
论文数: 0引用数: 0
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机构:
Albert Einstein Coll Med, Dept Genet, 1301 Morris Pk Ave, Bronx, NY 10461 USA
Albert Einstein Coll Med, Dept Ophthalmol & Visual Sci, 1301 Morris Pk Ave, Bronx, NY 10461 USAAlbert Einstein Coll Med, Dept Genet, 1301 Morris Pk Ave, Bronx, NY 10461 USA
机构:
Columbia Univ, Dept Biol Sci, New York, NY 10025 USA
New York Genome Ctr, New York, NY 10013 USAColumbia Univ, Dept Biol Sci, New York, NY 10025 USA
Chen, Chen
Qi, Hongjian
论文数: 0引用数: 0
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机构:
Columbia Univ, Dept Appl Phys & Appl Math, New York, NY 10025 USA
Columbia Univ, Med Ctr, Dept Syst Biol, New York, NY 10032 USAColumbia Univ, Dept Biol Sci, New York, NY 10025 USA
Qi, Hongjian
Shen, Yufeng
论文数: 0引用数: 0
h-index: 0
机构:
Columbia Univ, Dept Biomed Informat, New York, NY 10025 USA
Columbia Univ, Med Ctr, Dept Syst Biol, New York, NY 10032 USAColumbia Univ, Dept Biol Sci, New York, NY 10025 USA
Shen, Yufeng
Pickrell, Joseph
论文数: 0引用数: 0
h-index: 0
机构:
Columbia Univ, Dept Biol Sci, New York, NY 10025 USA
New York Genome Ctr, New York, NY 10013 USAColumbia Univ, Dept Biol Sci, New York, NY 10025 USA
Pickrell, Joseph
Przeworski, Molly
论文数: 0引用数: 0
h-index: 0
机构:
Columbia Univ, Dept Biol Sci, New York, NY 10025 USA
Columbia Univ, Med Ctr, Dept Syst Biol, New York, NY 10032 USAColumbia Univ, Dept Biol Sci, New York, NY 10025 USA
机构:
Columbia Univ, Dept Biol Sci, New York, NY 10027 USAColumbia Univ, Dept Biol Sci, New York, NY 10027 USA
Milligan, William R.
Amster, Guy
论文数: 0引用数: 0
h-index: 0
机构:
Columbia Univ, Dept Biol Sci, New York, NY 10027 USA
Flatiron Hlth Inc, New York, NY 10013 USAColumbia Univ, Dept Biol Sci, New York, NY 10027 USA
Amster, Guy
Sella, Guy
论文数: 0引用数: 0
h-index: 0
机构:
Columbia Univ, Dept Biol Sci, New York, NY 10027 USA
Columbia Univ, Program Math Genom, New York, NY 10032 USAColumbia Univ, Dept Biol Sci, New York, NY 10027 USA
机构:
Columbia Univ, Dept Biol Sci, New York, NY 10027 USAColumbia Univ, Dept Biol Sci, New York, NY 10027 USA
Moorjani, Priya
Gao, Ziyue
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Howard Hughes Med Inst, Stanford, CA 94305 USA
Stanford Univ, Dept Genet, Stanford, CA 94305 USAColumbia Univ, Dept Biol Sci, New York, NY 10027 USA
Gao, Ziyue
Przeworski, Molly
论文数: 0引用数: 0
h-index: 0
机构:
Columbia Univ, Dept Biol Sci, New York, NY 10027 USA
Columbia Univ, Dept Syst Biol, New York, NY USAColumbia Univ, Dept Biol Sci, New York, NY 10027 USA
机构:
Shenzhen Guangming Dist Ctr Dis Control & Prevent, Ctr Chron Dis Control & Prevent, Shenzhen, Guangdong, Peoples R ChinaShenzhen Guangming Dist Ctr Dis Control & Prevent, Ctr Chron Dis Control & Prevent, Shenzhen, Guangdong, Peoples R China
Chen, Xiaoliang
Zou, Xiaochun
论文数: 0引用数: 0
h-index: 0
机构:
Shenzhen Guangming Dist Ctr Dis Control & Prevent, Ctr Chron Dis Control & Prevent, Shenzhen, Guangdong, Peoples R ChinaShenzhen Guangming Dist Ctr Dis Control & Prevent, Ctr Chron Dis Control & Prevent, Shenzhen, Guangdong, Peoples R China
Zou, Xiaochun
Zhong, Weiyi
论文数: 0引用数: 0
h-index: 0
机构:
Shenzhen Guangming Dist Ctr Dis Control & Prevent, Ctr Chron Dis Control & Prevent, Shenzhen, Guangdong, Peoples R ChinaShenzhen Guangming Dist Ctr Dis Control & Prevent, Ctr Chron Dis Control & Prevent, Shenzhen, Guangdong, Peoples R China
Zhong, Weiyi
Peng, Ke
论文数: 0引用数: 0
h-index: 0
机构:
UNSW, George Inst Global Hlth, Sydney, NSW, AustraliaShenzhen Guangming Dist Ctr Dis Control & Prevent, Ctr Chron Dis Control & Prevent, Shenzhen, Guangdong, Peoples R China
Peng, Ke
Wang, Dongli
论文数: 0引用数: 0
h-index: 0
机构:
Shenzhen Guangming Dist Ctr Dis Control & Prevent, Ctr Chron Dis Control & Prevent, Shenzhen, Guangdong, Peoples R ChinaShenzhen Guangming Dist Ctr Dis Control & Prevent, Ctr Chron Dis Control & Prevent, Shenzhen, Guangdong, Peoples R China
Wang, Dongli
Fan, Wei
论文数: 0引用数: 0
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机构:
Cedars Sinai Med Ctr, Div Digest & Liver Dis, Los Angeles, CA 90048 USAShenzhen Guangming Dist Ctr Dis Control & Prevent, Ctr Chron Dis Control & Prevent, Shenzhen, Guangdong, Peoples R China
Fan, Wei
Lin, Jinbo
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机构:
Longgang Cent Hosp Shenzhen, Dept Oncol, Shenzhen, Guangdong, Peoples R ChinaShenzhen Guangming Dist Ctr Dis Control & Prevent, Ctr Chron Dis Control & Prevent, Shenzhen, Guangdong, Peoples R China
Lin, Jinbo
Peng, Ji
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机构:
Shenzhen Ctr Chron Dis Control & Prevent, Dept Prevent & Treatment Chron Noncommunicable Di, 2021 Bu Xin Rd, Shenzhen 518020, Guangdong, Peoples R ChinaShenzhen Guangming Dist Ctr Dis Control & Prevent, Ctr Chron Dis Control & Prevent, Shenzhen, Guangdong, Peoples R China
机构:
Barcelona Inst Sci & Technol, Ctr Genom Regulat CRG, Dr Aiguader 88, Barcelona 08003, SpainBarcelona Inst Sci & Technol, Ctr Genom Regulat CRG, Dr Aiguader 88, Barcelona 08003, Spain
Rodriguez-Galindo, Miguel
Casillas, Sonia
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机构:
Univ Autonoma Barcelona, Inst Biotechnol & Biomed, Barcelona 08193, Spain
Univ Autonoma Barcelona, Dept Genet & Microbiol, Barcelona 08193, SpainBarcelona Inst Sci & Technol, Ctr Genom Regulat CRG, Dr Aiguader 88, Barcelona 08003, Spain
Casillas, Sonia
Weghorn, Donate
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机构:
Barcelona Inst Sci & Technol, Ctr Genom Regulat CRG, Dr Aiguader 88, Barcelona 08003, Spain
Univ Pompeu Fabra UPF, Barcelona, SpainBarcelona Inst Sci & Technol, Ctr Genom Regulat CRG, Dr Aiguader 88, Barcelona 08003, Spain
Weghorn, Donate
Barbadilla, Antonio
论文数: 0引用数: 0
h-index: 0
机构:
Univ Autonoma Barcelona, Inst Biotechnol & Biomed, Barcelona 08193, Spain
Univ Autonoma Barcelona, Dept Genet & Microbiol, Barcelona 08193, SpainBarcelona Inst Sci & Technol, Ctr Genom Regulat CRG, Dr Aiguader 88, Barcelona 08003, Spain