Annual Review of Genomics and Human Genetics Polygenic Risk Scores Driving Clinical Change in Glaucoma

被引:4
作者
Kolovos, Antonia [1 ]
Hassall, Mark M. [1 ]
Siggs, Owen M. [1 ,2 ]
Souzeau, Emmanuelle [1 ]
Craig, Jamie E. [1 ]
机构
[1] Flinders Univ S Australia, Flinders Hlth & Med Res Inst, Dept Ophthalmol, Adelaide, SA, Australia
[2] Garvan Inst Med Res, Darlinghurst, NSW, Australia
基金
英国医学研究理事会;
关键词
glaucoma; polygenic risk score; polygenic score; POAG; PRS; PGS; OPEN-ANGLE GLAUCOMA; OCULAR HYPERTENSION TREATMENT; REPORTED FAMILY-HISTORY; WIDE ASSOCIATION; INTRAOCULAR-PRESSURE; COMMON VARIANTS; MITOCHONDRIAL DYSFUNCTION; SUSCEPTIBILITY LOCI; MYOCILIN MUTATIONS; PREVALENCE;
D O I
10.1146/annurev-genom-121222-105817
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Glaucoma is a clinically heterogeneous disease and the world's leading cause of irreversible blindness. Therapeutic intervention can prevent blindness but relies on early diagnosis, and current clinical risk factors are limited in their ability to predict who will develop sight-threatening glaucoma. The high heritability of glaucoma makes it an ideal substrate for genetic risk prediction, with the bulk of risk being polygenic in nature. Here, we summarize the foundations of glaucoma genetic risk, the development of polygenic risk prediction instruments, and emerging opportunities for genetic risk stratification. Although challenges remain, genetic risk stratification will significantly improve glaucoma screening and management.
引用
收藏
页码:287 / 308
页数:22
相关论文
共 147 条
[1]   Recurrent mutations in a single exon encoding the evolutionarily conserved olfactomedin-homology domain of TIGR in familial open-angle glaucoma [J].
Adam, MF ;
Belmouden, A ;
Binisti, P ;
Brezin, AP ;
Valtot, F ;
Bechetoille, A ;
Dascotte, JC ;
Copin, B ;
Gomez, T ;
Chaventre, A ;
Bach, JF ;
Garchon, HJ .
HUMAN MOLECULAR GENETICS, 1997, 6 (12) :2091-2097
[2]   Large-scale machine-learning-based phenotyping significantly improves genomic discovery for optic nerve head morphology [J].
Alipanahi, Babak ;
Hormozdiari, Farhad ;
Behsaz, Babak ;
Cosentino, Justin ;
McCaw, Zachary R. ;
Schorsch, Emanuel ;
Sculley, D. ;
Dorfman, Elizabeth H. ;
Foster, Paul J. ;
Peng, Lily H. ;
Phene, Sonia ;
Hammel, Naama ;
Carroll, Andrew ;
Khawaja, Anthony P. ;
McLean, Cory Y. .
AMERICAN JOURNAL OF HUMAN GENETICS, 2021, 108 (07) :1217-1230
[3]  
Anderson Douglas R, 2003, Curr Opin Ophthalmol, V14, P86
[4]   Risk-Stratified Breast Cancer Screening Incorporating a Polygenic Risk Score: A Survey of UK General Practitioners' Knowledge and Attitudes [J].
Ayoub, Aya ;
Lapointe, Julie ;
Nabi, Hermann ;
Pashayan, Nora .
GENES, 2023, 14 (03)
[5]   Genome-wide association analysis identifies TXNRD2, ATXN2 and FOXC1 as susceptibility loci for primary open-angle glaucoma [J].
Bailey, Jessica N. Cooke ;
Loomis, Stephanie J. ;
Kang, Jae H. ;
Allingham, R. Rand ;
Gharahkhani, Puya ;
Khor, Chiea Chuen ;
Burdon, Kathryn P. ;
Aschard, Hugues ;
Chasman, Daniel I. ;
Igo, Robert P., Jr. ;
Hysi, Pirro G. ;
Glastonbury, Craig A. ;
Ashley-Koch, Allison ;
Brilliant, Murray ;
Brown, Andrew A. ;
Budenz, Donald L. ;
Buil, Alfonso ;
Cheng, Ching-Yu ;
Choi, Hyon ;
Christen, William G. ;
Curhan, Gary ;
De Vivo, Immaculata ;
Fingert, John H. ;
Foster, Paul J. ;
Fuchs, Charles ;
Gaasterland, Douglas ;
Gaasterland, Terry ;
Hewitt, Alex W. ;
Hu, Frank ;
Hunter, David J. ;
Khawaja, Anthony P. ;
Lee, Richard K. ;
Li, Zheng ;
Lichter, Paul R. ;
Mackey, David A. ;
McGuffin, Peter ;
Mitchell, Paul ;
Moroi, Sayoko E. ;
Perera, Shamira A. ;
Pepper, Keating W. ;
Qi, Qibin ;
Realini, Tony ;
Richards, Julia E. ;
Ridker, Paul M. ;
Rimm, Eric ;
Ritch, Robert ;
Ritchie, Marylyn ;
Schuman, Joel S. ;
Scott, William K. ;
Singh, Kuldev .
NATURE GENETICS, 2016, 48 (02) :189-194
[6]   Analysis of 15 primary open-angle glaucoma families from Australia identifies a founder effect for the Q368STOP mutation of myocilin [J].
Baird, PN ;
Craig, JE ;
Richardson, AJ ;
Ring, MA ;
Sim, P ;
Stanwix, S ;
Foote, SJ ;
Mackey, DA .
HUMAN GENETICS, 2003, 112 (02) :110-116
[7]   Specifications of the ACMG/AMP variant curation guidelines for myocilin: Recommendations from the clingen glaucoma expert panel [J].
Burdon, Kathryn P. ;
Graham, Patricia ;
Hadler, Johanna ;
Hulleman, John D. ;
Pasutto, Francesca ;
Boese, Erin A. ;
Craig, Jamie E. ;
Fingert, John H. ;
Hewitt, Alex W. ;
Siggs, Owen M. ;
Whisenhunt, Kristina ;
Young, Terri L. ;
Mackey, David A. ;
Dubowsky, Andrew ;
Souzeau, Emmanuelle .
HUMAN MUTATION, 2022, 43 (12) :2170-2186
[8]   Genome-wide association study identifies susceptibility loci for open angle glaucoma at TMCO1 and CDKN2B-AS1 [J].
Burdon, Kathryn P. ;
Macgregor, Stuart ;
Hewitt, Alex W. ;
Sharma, Shiwani ;
Chidlow, Glyn ;
Mills, Richard A. ;
Danoy, Patrick ;
Casson, Robert ;
Viswanathan, Ananth C. ;
Liu, Jimmy Z. ;
Landers, John ;
Henders, Anjali K. ;
Wood, John ;
Souzeau, Emmanuelle ;
Crawford, April ;
Leo, Paul ;
Wang, Jie Jin ;
Rochtchina, Elena ;
Nyholt, Dale R. ;
Martin, Nicholas G. ;
Montgomery, Grant W. ;
Mitchell, Paul ;
Brown, Matthew A. ;
Mackey, David A. ;
Craig, Jamie E. .
NATURE GENETICS, 2011, 43 (06) :574-U110
[9]   The clinical effectiveness and cost-effectiveness of screening for open angle glaucoma: a systematic review and economic evaluation [J].
Burr, Jm ;
Mowatt, G. ;
Hernandez, R. ;
Siddiqui, Mar ;
Cook, J. ;
Lourenco, T. ;
Ramsay, C. ;
Vale, L. ;
Fraser, C. ;
Azuara-Blanco, A. ;
Deeks, J. ;
Cairns, J. ;
Wormald, R. ;
McPherson, S. ;
Rabindranath, K. ;
Grant, A. .
HEALTH TECHNOLOGY ASSESSMENT, 2007, 11 (41) :1-+
[10]   OCT for glaucoma diagnosis, screening and detection of glaucoma progression [J].
Bussel, Igor I. ;
Wollstein, Gadi ;
Schuman, Joel S. .
BRITISH JOURNAL OF OPHTHALMOLOGY, 2014, 98 :15-19