Insight into the in silico Study and Biological Evaluation of Curcumin Analogue Compounds as New Potential Inhibitors for Dengue DEN2 NS2B/NS3 Serine Protease
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Frimayanti, Neni
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Sekolah Tinggi Ilmu Farm Riau, Pekanbaru, IndonesiaSekolah Tinggi Ilmu Farm Riau, Pekanbaru, Indonesia
Frimayanti, Neni
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Herfindo, Noval
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Univ Riau, Fac Math & Nat Prod, Dept Chem, Kampus Bina Widya KM 12,5 Simpang Baru, Pekanbaru 28293, Riau, IndonesiaSekolah Tinggi Ilmu Farm Riau, Pekanbaru, Indonesia
Herfindo, Noval
[2
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Aisyah, Siti
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Rahmawaty, Eni Nur
[2
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[1] Sekolah Tinggi Ilmu Farm Riau, Pekanbaru, Indonesia
[2] Univ Riau, Fac Math & Nat Prod, Dept Chem, Kampus Bina Widya KM 12,5 Simpang Baru, Pekanbaru 28293, Riau, Indonesia
Dengue is an infectious disease caused by a virus and it is a rapidly emerging pandemic disease in many parts of the world. However, to date, one licensed tetravalent Dengvaxia vaccine based on a yellow fever virus vaccine variant has been reported. In silico and biological assay were performed to twenty two curcumin analogue compounds with DEN2 NS2B/NS3 B/N S3 serine protease as target. The main purpose of this study were to predict and estimate the binding interaction and also the ability of curcumin analogue compounds to be potential inhibitors for DEN2 NS2B/NS3. B/N S3. Computational pipeline such as molecular docking and molecular dynamic were constructed to get insight into potential inhibitor for DEN2 NS2B/NS3. B/N S3. Biological assay was performed to validate in silico results. Docking results reported that compounds 3 , 10 , and 13 have the lowest binding free energy value of-15.2 kcal/mol,-13.66 kcal/mol and-13.68 kcal/mol, respectively. All these three compounds were also able to interacts with Lys74 (i.e., allosteric site of serine protease) through hydrogen bonding, these binding is keep maintain during the molecular dynamic simulation. Among all of the compounds tested on their percent inhibition against DEN2 NS2B/NS3, B/N S3, compounds 3 , 10 , and 13 exhibited the best of percent inhibition. Thus, three of these compounds can be used as potential candidate for the next stage in the drug discovery process.
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Calif Polytech State Univ San Luis Obispo, 1 Grand Ave, San Luis Obispo, CA 93407 USACalif Polytech State Univ San Luis Obispo, 1 Grand Ave, San Luis Obispo, CA 93407 USA
Bowen, Lucy R.
Li, Dennis J.
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Calif Polytech State Univ San Luis Obispo, 1 Grand Ave, San Luis Obispo, CA 93407 USACalif Polytech State Univ San Luis Obispo, 1 Grand Ave, San Luis Obispo, CA 93407 USA
Li, Dennis J.
Nola, Derek T.
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Calif Polytech State Univ San Luis Obispo, 1 Grand Ave, San Luis Obispo, CA 93407 USACalif Polytech State Univ San Luis Obispo, 1 Grand Ave, San Luis Obispo, CA 93407 USA
Nola, Derek T.
Anderson, Marc O.
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San Francisco State Univ, 1600 Holloway Ave, San Francisco, CA 94132 USACalif Polytech State Univ San Luis Obispo, 1 Grand Ave, San Luis Obispo, CA 93407 USA
Anderson, Marc O.
Heying, Michael
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Calif Polytech State Univ San Luis Obispo, 1 Grand Ave, San Luis Obispo, CA 93407 USACalif Polytech State Univ San Luis Obispo, 1 Grand Ave, San Luis Obispo, CA 93407 USA
Heying, Michael
Groves, Adam T.
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Calif Polytech State Univ San Luis Obispo, 1 Grand Ave, San Luis Obispo, CA 93407 USACalif Polytech State Univ San Luis Obispo, 1 Grand Ave, San Luis Obispo, CA 93407 USA
Groves, Adam T.
Eagon, Scott
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Calif Polytech State Univ San Luis Obispo, 1 Grand Ave, San Luis Obispo, CA 93407 USACalif Polytech State Univ San Luis Obispo, 1 Grand Ave, San Luis Obispo, CA 93407 USA