Machine learning-assisted label-free colorectal cancer diagnosis using plasmonic needle-endoscopy system

被引:7
作者
Jo, Kangseok [1 ,2 ]
Linh, Vo Thi Nhat [1 ]
Yang, Jun-Yeong [1 ]
Heo, Boyou [1 ]
Kim, Jun Young [1 ]
Mun, Na Eun [3 ,4 ,5 ,6 ]
Im, Jin Hee [4 ,5 ,6 ]
Kim, Ki Su [2 ]
Park, Sung-Gyu [1 ]
Lee, Min-Young [1 ,6 ]
Yoo, Su Woong [3 ,4 ,5 ,6 ]
Jung, Ho Sang [1 ,7 ,8 ]
机构
[1] Korea Inst Mat Sci KIMS, Adv Bio & Healthcare Mat Res Div, Chang Won 51508, South Korea
[2] Pusan Natl Univ, Sch Chem Engn, Busan 46241, South Korea
[3] Chonnam Natl Univ, Biomed Sci Grad Program, Hwasun 58128, South Korea
[4] Chonnam Natl Univ, Med Sch, Dept Nucl Med, Hwasun 58128, South Korea
[5] Hwasun Hosp, Hwasun 58128, South Korea
[6] Chonnam Natl Univ, Med Sch, Inst Mol Imaging & Theranost, Hwasun 58128, South Korea
[7] Univ Sci & Technol UST, Adv Mat Engn Div, Daejeon 34113, South Korea
[8] Pohang Univ Sci & Technol POSTECH, Sch Convergence Sci & Technol Med Sci & Engn, Pohang 37673, South Korea
基金
新加坡国家研究基金会;
关键词
Plasmonic materials; Endoscopy; Cancer diagnosis; Surface-enhance Raman scattering (SERS); Machine learning; RAMAN-SPECTROSCOPY; SERS SUBSTRATE; AMINO-ACIDS; EARLY-STAGE; COLON; CELLS; N-1; N-12-DIACETYLSPERMINE; LITHOGRAPHY; METABOLISM; SECRETION;
D O I
10.1016/j.bios.2024.116633
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Early and accurate detection of colorectal cancer (CRC) is critical for improving patient outcomes. Existing diagnostic techniques are often invasive and carry risks of complications. Herein, we introduce a plasmonic gold nanopolyhedron (AuNH)-coated needle-based surface-enhanced Raman scattering (SERS) sensor, integrated with endoscopy, for direct mucus sampling and label-free detection of CRC. The thin and flexible stainless-steel needle is coated with polymerized dopamine, which serves as an adhesive layer and simultaneously initiates the nucleation of gold nanoparticle (AuNP) seeds on the needle surface. The AuNP seeds are further grown through a surface-directed reduction using Au ions-hydroxylamine hydrochloride solution, resulting in the formation of dense AuNHs. The formation mechanism of AuNHs and the layered structure of the plasmonic needle-based SERS (PNS) sensor are thoroughly analyzed. Furthermore, a strong field enhancement of the PNS sensor is observed, amplified around the edges of the polyhedral shapes and at nanogap sites between AuNHs. The feasibility of the PNS sensor combined with endoscopy system is further investigated using mouse models for direct colonic mucus sampling and verifying noninvasive label-free classification of CRC from normal controls. A logistic regression- based machine learning method is employed and successfully differentiates CRC and normal mice, achieving 100% sensitivity, 93.33% specificity, and 96.67% accuracy. Moreover, Raman profiling of metabolites and their correlations with Raman signals of mucus samples are analyzed using the Pearson correlation coefficient, offering insights for identifying potential cancer biomarkers. The developed PNS-assisted endoscopy technology is expected to advance the early screening and diagnosis approach of CRC in the future.
引用
收藏
页数:11
相关论文
共 90 条
[81]   A facile low-cost paper-based SERS substrate for label-free molecular detection [J].
Vo Thi Nhat Linh ;
Moon, Jungil ;
Mun, ChaeWon ;
Devaraj, Vasanthan ;
Oh, Jin-Woo ;
Park, Sung-Gyu ;
Kim, Dong-Ho ;
Choo, Jaebum ;
Lee, Yong-Ill ;
Jung, Ho Sang .
SENSORS AND ACTUATORS B-CHEMICAL, 2019, 291 :369-377
[82]   Rosmarinic Acid Restores Colonic Mucus Secretion in Colitis Mice by Regulating Gut Microbiota-Derived Metabolites and the Activation of Inflammasomes [J].
Wang, Qun ;
Xu, Kangjie ;
Cai, Xu ;
Wang, Chujing ;
Cao, Yong ;
Xiao, Jie .
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2023, 71 (11) :4571-4585
[83]   Amino acids and risk of colon adenocarcinoma: a Mendelian randomization study [J].
Wang, Yuanyuan ;
Jia, Zhihan ;
Wang, Qingjun ;
Zhu, Zhitu .
BMC CANCER, 2023, 23 (01)
[84]   Fatty acid synthase promotes breast cancer metastasis by mediating changes in fatty acid metabolism [J].
Xu, Shuo ;
Chen, Tingting ;
Dong, Lihua ;
Li, Tao ;
Xue, Hui ;
Gao, Bo ;
Ding, Xiaodong ;
Wang, Hui ;
Li, Hua .
ONCOLOGY LETTERS, 2021, 21 (01)
[85]   Thymine DNA Glycosylase Is a Positive Regulator of Wnt Signaling in Colorectal Cancer [J].
Xu, Xuehe ;
Yu, Tianxin ;
Shi, Jiandang ;
Chen, Xi ;
Zhang, Wen ;
Lin, Ting ;
Liu, Zhihong ;
Wang, Yadong ;
Zeng, Zheng ;
Wang, Chi ;
Li, Mingsong ;
Liu, Chunming .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2014, 289 (13) :8881-8890
[86]   Development of Dual-Scale Fluorescence Endoscopy for In Vivo Bacteria Imaging in an Orthotopic Mouse Colon Tumor Model [J].
Yoo, Su Woong ;
Dinh-huy Nguyen ;
Park, Suhyeon ;
Lee, Hyeri ;
Lee, Chang-Moon ;
Lee, Changho ;
Min, Jung-Joon .
APPLIED SCIENCES-BASEL, 2020, 10 (03)
[87]   Endoscopic non-ablative fractional laser therapy in an orthotopic colon tumour model [J].
Yoo, Su Woong ;
Oh, Gyungseok ;
Safi, Abdul Mohaimen ;
Hwang, Soonjoo ;
Seo, Young-Seok ;
Lee, Kyung-Hwa ;
Kim, Young L. ;
Chung, Euiheon .
SCIENTIFIC REPORTS, 2018, 8
[88]   Bacteroides vulgatus SNUG 40005 Restores Akkermansia Depletion by Metabolite Modulation [J].
You, Hyun Ju ;
Si, Jiyeon ;
Kim, Jinwook ;
Yoon, Sunghyun ;
Cha, Kwang Hyun ;
Yoon, Hyo Shin ;
Lee, Giljae ;
Yu, Junsun ;
Choi, Joon-Sun ;
Jung, Minkyung ;
Kim, Do June ;
Lee, Yujin ;
Kim, Minyoung ;
Vazquez-Castellanos, Jorge F. ;
Sung, Joohon ;
Park, Jin Mo ;
Ko, GwangPyo .
GASTROENTEROLOGY, 2023, 164 (01) :103-116
[89]   Characteristics of fatty acid distribution is associated with colorectal cancer prognosis [J].
Zhang, Junjie ;
Zhang, Lijian ;
Ye, Xiaoxia ;
Chen, Liyu ;
Zhang, Liangtao ;
Gao, Yihua ;
Kang, Jing X. ;
Cai, Chun .
PROSTAGLANDINS LEUKOTRIENES AND ESSENTIAL FATTY ACIDS, 2013, 88 (05) :355-360
[90]   Grain size effects in polycrystalline gold nanoparticles [J].
Zhou, Chen ;
Yu, Jing ;
Qin, Yanping ;
Zheng, Jie .
NANOSCALE, 2012, 4 (14) :4228-4233