Identification of the ferroptosis-related gene signature and the associated regulation axis in lung cancer and rheumatoid arthritis

被引:1
作者
Cai, Bo [1 ]
Huang, Yibin [2 ]
Liu, Dandan [1 ]
You, Yizheng [3 ,4 ]
Chen, Nuoshi [1 ]
Jie, Ligang [1 ]
Du, Hongyan [1 ,3 ,4 ]
机构
[1] Southern Med Univ, ZhuJiang Hosp, Dept Rheumatol & Clin Immunol, Guangzhou, Guangdong, Peoples R China
[2] Southern Med Univ, Coll Clin Med 1, Guangzhou 510515, Guangdong, Peoples R China
[3] Southern Med Univ, Sch Lab Med & Biotechnol, Guangzhou, Guangdong, Peoples R China
[4] Southern Med Univ, Sch Lab Med & Biotechnol, Guangdong Prov Key Lab Immune Regulat & Immunother, Guangzhou, Guangdong, Peoples R China
关键词
SJOGRENS-SYNDROME; EXPRESSION; MICRORNA; CELLS; FIBROBLASTS; METABOLISM; DISEASE; RISK;
D O I
10.1038/s41435-024-00287-2
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Patients with Rheumatoid arthritis (RA) have an elevated risk of lung cancer compared to the healthy population. However, there are few studies on the relationship between RA and lung adenocarcinoma (LUAD), especially the mechanisms at the genetic level. In this study, we investigated the link between RA and LUAD regarding Ferroptosis-Related Genes. The RNA-seq data of RA (GSE77298 and GSE 82107) and LUAD(GSE75037) in the Gene Expression Omnibus (GEO) database were obtained. 259 ferroptosis-related genes were obtained from the website (http://www.zhounan.org/ferrdb/).The differential genes obtained from the RA and LUAD datasets were intersected with ferroptosis-related genes to obtain the ferroptosis-related differentially expressed genes (FRDEGs). Next, the mRNA-miRNA network was constructed, then Gene Set Enrichment Analysis (GSEA) for target genes were performed. The CIBERSORT algorithm was used to analyze the immune infiltration. Finally, the results were validated using external datasets (GSE89408 and GSE48780) and The Cancer Genome Atlas (TCGA) dataset. We obtained FRDEGs common to LUAD and RA: FANCD2, HELLS, RRM2, G6PD, VLDLR. These five genes play important roles in the progression of RA and LUAD. They also hold great diagnostic value for both diseases. Also, we found that LUAD and RA share common signaling pathways and similar immune mechanisms. We identified ferroptosis-related differentially expressed genes and possible signaling pathways in LUAD and RA from a bioinformatics approach.We use a bioinformatics approach to initially articulate the link between LUAD and RA.
引用
收藏
页码:367 / 380
页数:14
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