Advancements of CRISPR-Mediated Base Editing in Crops and Potential Applications in Populus

被引:1
作者
Yang, Xuefei [1 ]
Zhu, Ping [1 ]
Gui, Jinshan [1 ]
机构
[1] Zhejiang A&F Univ, State Key Lab Subtrop Silviculture, Hangzhou 311300, Peoples R China
基金
中国国家自然科学基金;
关键词
CRISPR-Cas9; genome editing; base editor; crop; Populus; GENOMIC DNA; TARGET BASE; RICE; RESISTANCE; EVOLUTION; REPEATS; EDITORS; REPAIR; SCOPE;
D O I
10.3390/ijms25158314
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Base editing represents a cutting-edge genome editing technique that utilizes the CRISPR system to guide base deaminases with high precision to specific genomic sites, facilitating the targeted alteration of individual nucleotides. Unlike traditional gene editing approaches, base editing does not require DNA double-strand breaks or donor templates. It functions independently of the cellular DNA repair machinery, offering significant advantages in terms of both efficiency and accuracy. In this review, we summarize the core design principles of various DNA base editors, their distinctive editing characteristics, and tactics to refine their efficacy. We also summarize their applications in crop genetic improvement and explore their potential contributions to forest genetic engineering.
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页数:14
相关论文
共 81 条
[71]   CRISPR/Cas9-based gene activation and base editing in Populus [J].
Yao, Tao ;
Yuan, Guoliang ;
Lu, Haiwei ;
Liu, Yang ;
Zhang, Jin ;
Tuskan, Gerald A. ;
Muchero, Wellington ;
Chen, Jin-Gui ;
Yang, Xiaohan .
HORTICULTURE RESEARCH, 2023, 10 (06)
[72]   An SpG-Cas9-based cytosine base editor expands the scope of genome editing in carrot plants [J].
Yarra, Rajesh ;
Krysan, Patrick J. .
PLANT CELL REPORTS, 2024, 43 (03)
[73]   Diverse nucleotide substitutions in rice base editing mediated by novel TadA variants [J].
Yu, Man ;
Kuang, Yongjie ;
Wang, Chenyang ;
Wu, Xuemei ;
Li, Shaofang ;
Zhang, Dawei ;
Sun, Wenxian ;
Zhou, Xueping ;
Ren, Bin ;
Zhou, Huanbin .
PLANT COMMUNICATIONS, 2024, 5 (08)
[74]   Engineered Cas9 variant tools expand targeting scope of genome and base editing in rice [J].
Zeng, Dongchang ;
Li, Xitao ;
Huang, Jiafa ;
Li, Yangyang ;
Cai, Shuqiong ;
Yu, Weizhi ;
Li, Yingli ;
Huang, Yinpin ;
Xie, Xianrong ;
Gong, Qi ;
Tan, Jiantao ;
Zheng, Zhiye ;
Guo, Menghui ;
Liu, Yao-Guang ;
Zhu, Qinlong .
PLANT BIOTECHNOLOGY JOURNAL, 2020, 18 (06) :1348-1350
[75]   Targeted C•G-to-T•A base editing with TALE-cytosine deaminases in plants [J].
Zhang, Dingbo ;
Pries, Vanessa ;
Boch, Jens .
BMC BIOLOGY, 2024, 22 (01)
[76]   Generation of herbicide tolerance traits and a new selectable marker in wheat using base editing [J].
Zhang, Rui ;
Liu, Jinxing ;
Chai, Zhuangzhuang ;
Chen, Sha ;
Bai, Yang ;
Zong, Yuan ;
Chen, Kunling ;
Li, Jiayang ;
Jiang, Linjian ;
Gao, Caixia .
NATURE PLANTS, 2019, 5 (05) :480-485
[77]   TadA reprogramming to generate potent miniature base editors with high precision [J].
Zhang, Shuqian ;
Song, Liting ;
Yuan, Bo ;
Zhang, Cheng ;
Cao, Jixin ;
Chen, Jinlong ;
Qiu, Jiayi ;
Tai, Yilin ;
Chen, Jingqi ;
Qiu, Zilong ;
Zhao, Xing-Ming ;
Cheng, Tian-Lin .
NATURE COMMUNICATIONS, 2023, 14 (01)
[78]   Imperfect guide-RNA (igRNA) enables CRISPR single-base editing with ABE and CBE [J].
Zhao, Dongdong ;
Jiang, Guo ;
Li, Ju ;
Chen, Xuxu ;
Li, Siwei ;
Wang, Jie ;
Zhou, Zuping ;
Pu, Shiming ;
Dai, Zhubo ;
Ma, Yanhe ;
Bi, Changhao ;
Zhang, Xueli .
NUCLEIC ACIDS RESEARCH, 2022, 50 (07) :4161-4170
[79]  
Zhao DD, 2021, NAT BIOTECHNOL, V39, P35, DOI 10.1038/s41587-020-0592-2
[80]   Targeted A-to-T and A-to-C base replacement in maize using an optimized adenine base editor [J].
Zhong, Dating ;
Pan, Hong ;
Li, Kai ;
Zhou, Ying ;
Zhao, Feiyun ;
Ye, Lu ;
Ruan, Shuting ;
Deng, Qi ;
Xu, Jieting ;
Lu, Yuming .
PLANT BIOTECHNOLOGY JOURNAL, 2024, 22 (03) :541-543