Functional genomic characterization reveals the probiotic tendency and safety assessment of Exiguobacterium acetylicum G1-33 isolated from the gut of the hybrid grouper ( Epinephelus fuscoguttatus ♀ x E. lanceolatus ♂)

被引:2
作者
Xie, Guangting [1 ]
Zhang, Mingqing [1 ,2 ,3 ]
Zhong, Zhongxuan [1 ]
Zhu, Yating [1 ]
Fan, Xiaoxuan [1 ]
Li, Manfeng [1 ]
Xing, Ke [1 ]
Shu, Hu [1 ]
机构
[1] Guangzhou Univ, Sch Life Sci, Guangzhou 510006, Peoples R China
[2] Sun Yat Sen Univ, Sch Life Sci, State Key Lab Biocontrol, Guangdong Prov Key Lab Aquat Econ Anim, Guangzhou 510275, Peoples R China
[3] Sun Yat Sen Univ, Sch Life Sci, Southern Marine Sci & Engn Guangdong Lab Zhuhai, Guangzhou 510275, Peoples R China
关键词
Genome annotation; Antimicrobial activity; Antioxidant activity; Feed additives; Intestinal barrier function; TOLERANCE; GENES; ACID;
D O I
10.1016/j.aqrep.2024.102127
中图分类号
S9 [水产、渔业];
学科分类号
0908 ;
摘要
Probiotics are commonly used as nutritional supplements and antibiotic substitutes and thus are of great commercial interest. The present study was performed to demonstrate the probiotic potential of Exiguobacterium acetylicum G1-33 isolated from the gut of the hybrid grouper ( Epinephelus fuscoguttatus female x E. lanceolatus male ) by integrating genomics and phenotypic traits. In silico genome analysis confirmed its identity as E. acetylicum . Functional annotation of the genome revealed the existence of molecular markers responsible for the functional properties of potential probiotics, such as resistance to the host's harsh gastrointestinal environment, adhesion and colonization of the intestinal mucosa, competition and inhibition of pathogens, responses to oxidative stress, and biosynthesis of essential amino acids and vitamins. The genomic analysis was validated by in vitro experiments. Effective toxin-encoding genes were not identified in the G1-33 genome, and the safety of the strain was confirmed by in vitro experiments. These results indicate that E. acetylicum G1-33 exhibits excellent probiotic properties and can become a probiotic with high application value in aquaculture.
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页数:12
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共 48 条
  • [11] Csiszar J., 2016, Redox State Central Regul. Plant-cell Stress Respons., P137, DOI [10.1007/978-3-319-44081-17, DOI 10.1007/978-3-319-44081-1_7]
  • [12] Evaluation of the probiotic potential of Streptomyces antibioticus and Bacillus cereus on growth performance of freshwater catfish Heteropneustes fossilis
    Das, Susmita
    Mondal, Kausik
    Pal, Amit Kumar
    Sengupta, Chandan
    [J]. AQUACULTURE REPORTS, 2021, 20
  • [13] Physiological function analysis of Lactobacillus plantarum Y44 based on genotypic and phenotypic characteristics
    Gao, Yuan
    Liu, Yujun
    Sun, Mengying
    Zhang, Heping
    Mu, Guangqing
    Tuo, Yanfeng
    [J]. JOURNAL OF DAIRY SCIENCE, 2020, 103 (07) : 5916 - 5930
  • [14] A Review of the Advancements in Probiotic Delivery: Conventional vs. Non-conventional Formulations for Intestinal Flora Supplementation
    Govender, Mershen
    Choonara, Yahya E.
    Kumar, Pradeep
    du Toit, Lisa C.
    van Vuuren, Sandy
    Pillay, Viness
    [J]. AAPS PHARMSCITECH, 2014, 15 (01): : 29 - 43
  • [15] The genomic sequence of Exiguobacterium chiriqhucha str. N139 reveals a species that thrives in cold waters and extreme environmental conditions
    Gutierrez-Preciado, Ana
    Vargas-Chavez, Carlos
    Reyes-Prieto, Mariana
    Ordonez, Omar F.
    Santos-Garcia, Diego
    Rosas-Perez, Tania
    Valdivia-Anistro, Jorge
    Rebollar, Eria A.
    Saralegui, Andres
    Moya, Andres
    Merino, Enrique
    Farias, Maria Eugenia
    Latorre, Amparo
    Souza, Valeria
    [J]. PEERJ, 2017, 5
  • [16] Haiko Johanna, 2013, Biology (Basel), V2, P1242, DOI 10.3390/biology2041242
  • [17] The Diverse Functional Roles of Elongation Factor Tu (EF-Tu) in Microbial Pathogenesis
    Harvey, Kate L.
    Jarocki, Veronica M.
    Charles, Ian G.
    Djordjevic, Steven P.
    [J]. FRONTIERS IN MICROBIOLOGY, 2019, 10
  • [18] Fibronectin: a multidomain host adhesin targeted by bacterial fibronectin-binding proteins
    Henderson, Brian
    Nair, Sean
    Pallas, Jaqueline
    Williams, Mark A.
    [J]. FEMS MICROBIOLOGY REVIEWS, 2011, 35 (01) : 147 - 200
  • [19] High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries
    Jain, Chirag
    Rodriguez-R, Luis M.
    Phillippy, Adam M.
    Konstantinidis, Konstantinos T.
    Aluru, Srinivas
    [J]. NATURE COMMUNICATIONS, 2018, 9
  • [20] European Committee on Antimicrobial Susceptibility Testing (EUCAST) Technical Notes on antimicrobial susceptibility testing
    Kahlmeter, G.
    Brown, D. F. J.
    Goldstein, F. W.
    MacGowan, A. P.
    Mouton, J. W.
    Odenholt, I.
    Rodloff, A.
    Soussy, C-J.
    Steinbakk, M.
    Soriano, F.
    Stetsiouk, O.
    [J]. CLINICAL MICROBIOLOGY AND INFECTION, 2006, 12 (06) : 501 - 503