Spectroscopic, electrochemical, and molecular docking studies of the interaction between the antihistamine drug desloratadine and dsDNA

被引:3
作者
Bilkay, Mehmetcan [1 ]
Kanbes-Dindar, Cigdem [2 ]
Bozal-Palabiyik, Burcin [2 ]
Eren, Gokcen [3 ]
Kara, Hayriye Eda Satana [1 ]
Uslu, Bengi [2 ]
机构
[1] Gazi Univ, Fac Pharm, Dept Analyt Chem, TR-06330 Ankara, Turkiye
[2] Ankara Univ, Fac Pharm, Dept Analyt Chem, TR-06560 Ankara, Turkiye
[3] Gazi Univ, Fac Pharm, Dept Pharmaceut Chem, TR-06330 Ankara, Turkiye
关键词
DNA; Desloratadine; Interaction; Fluorescence; Electrochemistry; Molecular docking; DNA;
D O I
10.1016/j.ab.2024.115622
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Through the utilization of fluorescence spectroscopy, electrochemical, and molecular docking methods, this research investigates the interaction between the antihistamine drug desloratadine and calf thymus doublestranded DNA (ct-dsDNA). Deoxyguanosine (dGuo) and deoxyadenosine (dAdo) oxidation signals were diminished by incubation with varying concentrations of desloratadine, as determined by differential pulse voltammetry (DPV). This change was ascribed to desloratadine's binding mechanism to ct-dsDNA. The binding constant (Kb) between desloratadine and ct-dsDNA was determined to be 2.2 x 105 M- 1 throughout electrochemical experiments. In order to further develop our comprehension of the interaction mechanism between desloratadine and ct-dsDNA, a series of spectroscopic experiments and molecular docking simulations were conducted. The Kb value was found to be 8.85 x 104 M- 1 at a temperature of 25 degrees C by the use of fluorescence spectroscopic techniques. In summary, the utilization of electrochemical and spectroscopic techniques, alongside molecular docking investigations, has led to the prediction that desloratadine has the capability to interact with ct-dsDNA by groove binding.
引用
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页数:7
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共 35 条
[11]   Voltammetric studies on the HIV-1 inhibitory drug Efavirenz: The interaction between dsDNA and drug using electrochemical DNA biosensor and adsorptive stripping voltammetric determination on disposable pencil graphite electrode [J].
Dogan-Topal, Burcu ;
Uslu, Bengi ;
Ozkan, Sibel A. .
BIOSENSORS & BIOELECTRONICS, 2009, 24 (08) :2358-2364
[12]   Insights into Protein-Ligand Interactions: Mechanisms, Models, and Methods [J].
Du, Xing ;
Li, Yi ;
Xia, Yuan-Ling ;
Ai, Shi-Meng ;
Liang, Jing ;
Sang, Peng ;
Ji, Xing-Lai ;
Liu, Shu-Qun .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2016, 17 (02)
[13]   Spectrophotometric, spectrofluorometric and HPLC determination of desloratadine in dosage forms and human plasma [J].
El-Enany, Nailed ;
Ei--Siferbiny, Dina ;
Belal, Fathalla .
CHEMICAL & PHARMACEUTICAL BULLETIN, 2007, 55 (12) :1662-1670
[14]   Evaluation of the Interaction of Cinacalcet with Calf Thymus dsDNA: Use of Electrochemical, Spectrofluorimetric, and Molecular Docking Methods [J].
Erkmen, Cem ;
Unal, Didem Nur ;
Kurbanoglu, Sevinc ;
Eren, Gokcen ;
Uslu, Bengi .
BIOSENSORS-BASEL, 2022, 12 (05)
[15]   Glide: A new approach for rapid, accurate docking and scoring. 1. Method and assessment of docking accuracy [J].
Friesner, RA ;
Banks, JL ;
Murphy, RB ;
Halgren, TA ;
Klicic, JJ ;
Mainz, DT ;
Repasky, MP ;
Knoll, EH ;
Shelley, M ;
Perry, JK ;
Shaw, DE ;
Francis, P ;
Shenkin, PS .
JOURNAL OF MEDICINAL CHEMISTRY, 2004, 47 (07) :1739-1749
[16]   Desloratadine: A new, nonsedating. oral antihistamine [J].
Geha, RS ;
Meltzer, EO .
JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY, 2001, 107 (04) :752-762
[17]   Identifying and Characterizing Binding Sites and Assessing Druggability [J].
Halgren, Thomas A. .
JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2009, 49 (02) :377-389
[18]   The Interaction between DNA and Three Intercalating Anthracyclines Using Electrochemical DNA Nanobiosensor Based on Metal Nanoparticles Modified Screen-Printed Electrode [J].
Karadurmus, Leyla ;
Dogan-Topal, Burcu ;
Kurbanoglu, Sevinc ;
Shah, Afzal ;
Ozkan, Sibel A. .
MICROMACHINES, 2021, 12 (11)
[19]   Multi-spectroscopic DNA interaction studies of sunset yellow food additive [J].
Kashanian, Soheila ;
Zeidali, Sahar Heidary ;
Omidfar, Kobra ;
Shahabadi, Nahid .
MOLECULAR BIOLOGY REPORTS, 2012, 39 (12) :10045-10051
[20]   Electrochemical investigation of an interaction of the antidepressant drug aripiprazole with original and damaged calf thymus dsDNA [J].
Kurbanoglu, Sevinc ;
Dogan-Topal, Burcu ;
Hlavata, Lenka ;
Labuda, Jan ;
Ozkan, Sibel A. ;
Uslu, Bengi .
ELECTROCHIMICA ACTA, 2015, 169 :233-240