A Computational Analysis of the DMSO-Water Interaction: Toward the Implementation of an Accurate Force Field

被引:0
|
作者
Mancini, Luca [1 ]
Lombardi, Andrea [1 ,3 ]
Pirani, Fernando [2 ]
Pacifici, Leonardo [3 ]
Rosi, Marzio [2 ,3 ]
Faginas-Lago, Noelia [1 ,3 ]
机构
[1] Univ Perugia, Dipartimento Chim Biol & Biotecnol, I-06123 Perugia, Italy
[2] Univ Perugia, Dipartimento Ingn Civile & Ambientale, I-06125 Perugia, Italy
[3] Ist CNR Sci & Tecnol Chim Giulio Natta CNR SCITEC, I-06123 Perugia, Italy
关键词
Molecular Dynamics; Force Field; Improved Lennard-Jones; CORRELATED MOLECULAR CALCULATIONS; GAUSSIAN-BASIS SETS; DIMETHYL-SULFOXIDE; DYNAMICS SIMULATIONS; MODEL; MIXTURES;
D O I
10.1007/978-3-031-65329-2_24
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Molecular dynamics (MD) simulations represent an essential tool for the investigation of the chemical and physical properties of a large variety of systems, with a plethora of possible applications ranging from medicine to the development of new nanomaterials for energy purposes and carbon neutrality. The implementation of an accurate force field represents a key step in the overall theoretical analysis, allowing a correct representation of all the non-covalent interactions in the target system. The Improved Lennard-Jones potential (ILJ), developed to have a better representation of van der Waals interactions, represents a feasible methodology for the implementation of accurate force fields. The validity of the proposed methodology has been assessed by performing a theoretical investigation considering a mixture of dimethyl sulfoxide (DMSO) in water, which represents a strong cryoprotecting agent for biological samples. The ease of implementation and the low computational cost makes ILJ an excellent technique for the analysis of non-covalent interactions and the production of accurate MD force fields.
引用
收藏
页码:361 / 374
页数:14
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