Identification of Endoplasmic Reticulum Stress-Related Biomarkers in Coronary Artery Disease

被引:0
|
作者
Lin, Yuanyuan [1 ,2 ]
Ni, Lin [2 ]
Yang, Luqun [2 ]
Li, Hao [2 ]
Chen, Zelin [2 ]
Gao, Yuping [2 ]
Zhu, Kaiyi [2 ]
Jia, Yanni [1 ]
Wu, Zhifang [1 ]
Li, Sijin [1 ]
机构
[1] Shanxi Med Univ, Dept Nucl Med, Hosp 1, Taiyuan 030001, Shanxi, Peoples R China
[2] Shanxi Med Univ, Shanxi Bethune Hosp, Tongji Shanxi Hosp, Shanxi Acad Med Sci,Hosp 3, Taiyuan 030032, Peoples R China
关键词
R PACKAGE; T-CELLS; BLOOD; ATHEROSCLEROSIS; EXPRESSION; IMMUNITY; GAMMA;
D O I
10.1155/2024/4664731
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Coronary artery disease (CAD) is caused by atherosclerotic lesions in the coronary vessels. Endoplasmic reticulum stress (ERS) acts in cardiovascular disease, and its role in CAD is not clear. A total of 13 differentially expressed ERS-related genes (DEERSRGs) in CAD were identified. Functional enrichment analysis demonstrated the DEERSRGs were mainly enriched in endoplasmic reticulum (ER)-related pathways. Then, eight genes (RCN2, HRC, DERL2, RNF183, CRH, TMED2, PPP1R15A, and IL1A) were authenticated as ERS-related biomarkers in CAD by least absolute shrinkage and selection operator (LASSO). The receiver operating characteristic (ROC) analysis showed that the LASSO logistic model constructed based on biomarkers had a better diagnostic effect, which was confirmed by the ANN and GSE23561 datasets. Also, ROC results showed that seven of the eight biomarkers had better diagnostic effects. The nomogram model had good predictive power, and biomarkers were mostly enriched in pathways associated with CAD. The biomarkers were significantly associated with 10 immune cells, and RCN2, DERL2, TMED2, and RNF183 were negatively correlated with most chemokines. Eight biomarkers had significant correlations with both immunoinhibitors and immunostimulators. In addition, eight biomarkers were significantly different in both CAD and control samples, CRH and HRC were upregulated in CAD. The quantitative reverse transcription-polymerase chain reaction (qRT-PCR) showed that RCN2, HRC, DERL2, CRH, and IL1A were consistent with the bioinformatics analysis. RCN2, HRC, DERL2, RNF183, CRH, TMED2, PPP1R15A, and IL1A were identified as biomarkers of CAD. Functional enrichment analysis and immunoassays for biomarkers provide new ideas for the treatment of CAD.
引用
收藏
页数:19
相关论文
共 50 条
  • [41] Development of a Combined Oxidative Stress and Endoplasmic Reticulum Stress-Related Prognostic Signature for Hepatocellular Carcinoma
    Ma, Hui
    Li, Zhongchen
    Chen, Rongxin
    Ren, Zhenggang
    COMBINATORIAL CHEMISTRY & HIGH THROUGHPUT SCREENING, 2024, 27 (19) : 2850 - 2860
  • [42] The role of endoplasmic reticulum stress-related genes in the diagnosis and subtyping of non-alcoholic fatty liver disease
    Guo, Zihao
    Yu, Xiaoxiao
    Fang, Zhihao
    Yang, Kai
    Liu, Changxu
    Dong, Zhichao
    Liu, Chang
    GENERAL PHYSIOLOGY AND BIOPHYSICS, 2024, 43 (02) : 85 - 102
  • [43] Identification of an endoplasmic reticulum stress-related gene signature to predict prognosis and potential drugs of uterine corpus endometrial cancer
    Zhou, Pei
    Wu, Caiyun
    Ma, Cong
    Luo, Ting
    Yuan, Jing
    Zhou, Ping
    Wei, Zhaolian
    MATHEMATICAL BIOSCIENCES AND ENGINEERING, 2023, 20 (02) : 4018 - 4039
  • [44] Identification and Validation of Aging- and Endoplasmic Reticulum Stress-Related Genes in Periodontitis Using a Competing Endogenous RNA Network
    Feng, Xinran
    Peng, Da
    Qiu, Yunjing
    Guo, Qian
    Zhang, Xiaoyu
    Li, Zhixuan
    Pan, Chunling
    INFLAMMATION, 2024,
  • [45] Identification of Endoplasmic Reticulum Stress-Related Subtypes, Infiltration Analysis of Tumor Microenvironment, and Construction of a Prognostic Model in Colorectal Cancer
    Liu, Baike
    Yin, Xiaonan
    Jiang, Guangfu
    Li, Yang
    Jiang, Zhiyuan
    Qiang, Liming
    Chen, Na
    Fan, Yating
    Shen, Chaoyong
    Dai, Lei
    Yin, Yuan
    Zhang, Bo
    CANCERS, 2022, 14 (14)
  • [46] ENDOPLASMIC RETICULUM STRESS-RELATED GENE EXPRESSION CAN PREDICT RESPONSE TO BORTEZOMIB IN MYELOMA
    Tomoko, N.
    Masaki, R.
    Ayako, M.
    Mori, F.
    Asahi, I.
    Shigeru, K.
    Takashi, I.
    Hirokazu, K.
    Akio, N.
    Shinsuke, I.
    HAEMATOLOGICA, 2014, 99 : 101 - 101
  • [47] Construction of an endoplasmic reticulum stress-related signature in lung adenocarcinoma by comprehensive bioinformatics analysis
    Yang Wang
    Jun Nie
    Ling Dai
    Weiheng Hu
    Sen Han
    Jie Zhang
    Xiaoling Chen
    Xiangjuan Ma
    Guangming Tian
    Di Wu
    Ziran Zhang
    Jieran Long
    Jian Fang
    BMC Pulmonary Medicine, 23
  • [48] A novel endoplasmic reticulum stress-related lncRNA prognostic risk model for cutaneous melanoma
    An-an Li
    Fan Li
    Min Lan
    Yu Zhang
    Dong Xie
    Mei-ying Yan
    Journal of Cancer Research and Clinical Oncology, 2022, 148 : 3227 - 3241
  • [49] Development and validation of an endoplasmic reticulum stress-related molecular prognostic model for breast cancer
    Fan, Pengyu
    Wang, Jiajia
    Li, Ruolei
    Chang, Kexin
    Liu, Liuyin
    Wang, Yaping
    Wang, Zhe
    Zhang, Bo
    Ji, Cheng
    Zhang, Jian
    Chen, Suning
    Ling, Rui
    FRONTIERS IN ONCOLOGY, 2023, 13
  • [50] Comprehensive analysis of endoplasmic reticulum stress-related mechanisms in type 2 diabetes mellitus
    Liang, Bo
    Chen, Shu-Wen
    Li, Yuan-Yuan
    Zhang, Shun-Xiao
    Zhang, Yan
    WORLD JOURNAL OF DIABETES, 2023, 14 (06) : 820 - 845