RNA-Binding Small Molecules in Drug Discovery and Delivery: An Overview from Fundamentals

被引:0
作者
Chen, Siyi [1 ,2 ]
Mao, Qi [1 ,2 ]
Cheng, Hong [1 ,2 ]
Tai, Wanyi [1 ,2 ]
机构
[1] Wuhan Univ, Sch Pharmaceut Sci, Dept Pharmaceut Engn, Wuhan 430071, Hubei, Peoples R China
[2] Wuhan Univ, Dept Pharm, Zhongnan Hosp, Wuhan 430071, Hubei, Peoples R China
基金
国家重点研发计划; 中国国家自然科学基金;
关键词
HIV TAR RNA; GENE-EXPRESSION; TARGETING RNA; HIGH-AFFINITY; NEOMYCIN; DESIGN; CLEAVAGE; APTAMER; RIBOSWITCHES; 1ST;
D O I
10.1021/acs.jmedchem.4c01330
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
RNA molecules, similar to proteins, fold into complex structures to confer diverse functions in cells. The intertwining of functions with RNA structures offers a new therapeutic opportunity for small molecules to bind and manipulate disease-relevant RNA pathways, thus creating a therapeutic realm of RNA-binding small molecules. The ongoing interest in RNA targeting and subsequent screening campaigns have led to the identification of numerous compounds that can regulate RNAs from splicing, degradation to malfunctions, with therapeutic benefits for a variety of diseases. Moreover, along with the rise of RNA-based therapeutics, RNA-binding small molecules have expanded their application to the modification, regulation, and delivery of RNA drugs, leading to the burgeoning interest in this field. This Perspective overviews the emerging roles of RNA-binding small molecules in drug discovery and delivery, covering aspects from their action fundamentals to therapeutic applications, which may inspire researchers to advance the field.
引用
收藏
页码:16002 / 16017
页数:16
相关论文
共 142 条
  • [41] Small-Molecule Aptamer for Regulating RNA Functions in Mammalian Cells and Animals
    Fukunaga, Keisuke
    Dhamodharan, V.
    Miyahira, Nao
    Nomura, Yoko
    Mustafina, Kamila
    Oosumi, Yasuaki
    Takayama, Kosuke
    Kanai, Akira
    Yokobayashi, Yohei
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2023, 145 (14) : 7820 - 7828
  • [42] Antiviral effect of ribonuclease conjugated oligodeoxynucleotides targeting the IRES RNA of the hepatitis C virus
    Gamble, Carly
    Trotard, Maud
    Le Seyec, Jacques
    Abreu-Guerniou, Valerie
    Gernigon, Nicolas
    Berree, Fabienne
    Carboni, Bertrand
    Felden, Brice
    Gillet, Reynald
    [J]. BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2009, 19 (13) : 3581 - 3585
  • [43] The roles of structural dynamics in the cellular functions of RNAs
    Ganser, Laura R.
    Kelly, Megan L.
    Herschlag, Daniel
    Al-Hashimi, Hashim M.
    [J]. NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2019, 20 (08) : 474 - 489
  • [44] Contemporary Progress and Opportunities in RNA-Targeted Drug Discovery
    Garner, Amanda L.
    [J]. ACS MEDICINAL CHEMISTRY LETTERS, 2023, 14 (03): : 251 - 259
  • [45] RNA-binding proteins in human genetic disease
    Gebauer, Fatima
    Schwarzl, Thomas
    Valcarcel, Juan
    Hentze, Matthias W.
    [J]. NATURE REVIEWS GENETICS, 2021, 22 (03) : 185 - 198
  • [46] Zotatifin, an eIF4A-Selective Inhibitor, Blocks Tumor Growth in Receptor Tyrosine Kinase Driven Tumors
    Gerson-Gurwitz, Adina
    Young, Nathan P.
    Goel, Vikas K.
    Eam, Boreth
    Stumpf, Craig R.
    Chen, Joan
    Fish, Sarah
    Barrera, Maria
    Sung, Eric
    Staunton, Jocelyn
    Chiang, Gary G.
    Webster, Kevin R.
    Thompson, Peggy A.
    [J]. FRONTIERS IN ONCOLOGY, 2021, 11
  • [47] RNA structure and dynamics: A base pairing perspective
    Halder, Sukanya
    Bhattacharyya, Dhananjay
    [J]. PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY, 2013, 113 (02) : 264 - 283
  • [48] Targeting the SARS-CoV-2 RNA Genome with Small Molecule Binders and Ribonuclease Targeting Chimera (RIBOTAC) Degraders
    Haniff, Hafeez S.
    Tong, Yuquan
    Liu, Xiaohui
    Chen, Jonathan L.
    Suresh, Blessy M.
    Andrews, Ryan J.
    Peterson, Jake M.
    O'Leary, Collin A.
    Benhamou, Raphael, I
    Moss, Walter N.
    Disney, Matthew D.
    [J]. ACS CENTRAL SCIENCE, 2020, 6 (10) : 1713 - 1721
  • [49] Design of a small molecule that stimulates vascular endothelial growth factor A enabled by screening RNA fold-small molecule interactions
    Haniff, Hafeez S.
    Knerr, Laurent
    Liu, Xiaohui
    Crynen, Gogce
    Bostrom, Jonas
    Abegg, Daniel
    Adibekian, Alexander
    Lekah, Elizabeth
    Wang, Kye Won
    Cameron, Michael D.
    Yildirim, Ilyas
    Lemurell, Malin
    Disney, Matthew D.
    [J]. NATURE CHEMISTRY, 2020, 12 (10) : 952 - +
  • [50] Evidence for ligandable sites in structured RNA throughout the Protein Data Bank
    Hewitt, William M.
    Calabrese, David R.
    Schneekloth, John S., Jr.
    [J]. BIOORGANIC & MEDICINAL CHEMISTRY, 2019, 27 (11) : 2253 - 2260