Causes and Consequences of Varying Transposable Element Activity: An Evolutionary Perspective

被引:4
|
作者
Betancourt, Andrea J. [1 ]
Wei, Kevin H. -C. [2 ]
Huang, Yuheng [3 ]
Lee, Yuh Chwen G. [3 ,4 ]
机构
[1] Univ Liverpool, Inst Infect Vet & Ecol Sci, Liverpool, England
[2] Univ British Columbia, Dept Zool, Vancouver, BC, Canada
[3] Univ Calif Irvine, Dept Ecol & Evolutionary Biol, Irvine, CA 92697 USA
[4] Univ Calif Irvine, Ctr Complex Biol Syst, Irvine, CA 92697 USA
基金
欧洲研究理事会; 美国国家卫生研究院; 加拿大自然科学与工程研究理事会;
关键词
transposable elements; transposition; evolution; population genetics; arms; race; ROLLING-CIRCLE TRANSPOSONS; M HYBRID DYSGENESIS; L1; RETROTRANSPOSITION; LINE-1; DROSOPHILA-MELANOGASTER; POPULATION-GENETICS; GENOME INSTABILITY; SOMATIC MOSAICISM; SVA ELEMENTS; LONG-TERM;
D O I
10.1146/annurev-genom-120822-105708
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Transposable elements (TEs) are genomic parasites found in nearly all eukaryotes, including humans. This evolutionary success of TEs is due to their replicative activity, involving insertion into new genomic locations. TE activity varies at multiple levels, from between taxa to within individuals. The rapidly accumulating evidence of the influence of TE activity on human health, as well as the rapid growth of new tools to study it, motivated an evaluation of what we know about TE activity thus far. Here, we discuss why TE activity varies, and the consequences of this variation, from an evolutionary perspective. By studying TE activity in nonhuman organisms in the context of evolutionary theories, we can shed light on the factors that affect TE activity. While the consequences of TE activity are usually deleterious, some have lasting evolutionary impacts by conferring benefits on the host or affecting other evolutionary processes.
引用
收藏
页码:1 / 25
页数:25
相关论文
共 50 条
  • [21] Causes and consequences of linkage disequilibrium among transposable elements within eukaryotic genomes
    Roze, Denis
    GENETICS, 2023, 224 (02)
  • [22] Evolutionary causes and consequences of sequential polyandry in anuran amphibians
    Byrne, Phillip G.
    Roberts, J. Dale
    BIOLOGICAL REVIEWS, 2012, 87 (01) : 209 - 228
  • [23] Transposable element and host silencing activity in gigantic genomes
    Wang, Jie
    Yuan, Liang
    Tang, Jiaxing
    Liu, Jiongyu
    Sun, Cheng
    Itgen, Michael W.
    Chen, Guiying
    Sessions, Stanley K.
    Zhang, Guangpu
    Mueller, Rachel Lockridge
    FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 2023, 11
  • [24] Intrinsic Characteristics of Neighboring DNA Modulate Transposable Element Activity in Drosophila melanogaster
    Esnault, Caroline
    Palavesam, Azhahianambi
    Pilitt, Kristina
    O'Brochta, David A.
    GENETICS, 2011, 187 (01) : 319 - 331
  • [25] The somatic mobilization of transposable element mariner-Mos1 during the Drosophila lifespan and its biological consequences
    Pereira, Camila M.
    Stoffel, Tailini J. R.
    Callegari-Jacques, Sidia M.
    Hua-Van, Aurelie
    Capy, Pierre
    Loreto, Elgion L. S.
    GENE, 2018, 679 : 65 - 72
  • [26] Transposable element activity captures human pluripotent cell states
    Levin-Ferreyra, Florencia
    Kodali, Srikanth
    Cui, Yingzhi
    Pashos, Alison R. S.
    Pessina, Patrizia
    Brumbaugh, Justin
    Di Stefano, Bruno
    EMBO REPORTS, 2025, 26 (02) : 329 - 352
  • [27] The evolutionary consequences of oxygenic photosynthesis: a body size perspective
    Jonathan L. Payne
    Craig R. McClain
    Alison G. Boyer
    James H. Brown
    Seth Finnegan
    Michał Kowalewski
    Richard A. Krause
    S. Kathleen Lyons
    Daniel W. McShea
    Philip M. Novack-Gottshall
    Felisa A. Smith
    Paula Spaeth
    Jennifer A. Stempien
    Steve C. Wang
    Photosynthesis Research, 2011, 107 : 37 - 57
  • [28] An evolutionary perspective on the causes and treatment of inflammatory bowel disease
    Ewald, Paul W.
    Ewald, Holly A. Swain
    CURRENT OPINION IN GASTROENTEROLOGY, 2013, 29 (04) : 350 - 356
  • [29] The evolutionary consequences of oxygenic photosynthesis: a body size perspective
    Payne, Jonathan L.
    McClain, Craig R.
    Boyer, Alison G.
    Brown, James H.
    Finnegan, Seth
    Kowalewski, Michal
    Krause, Richard A., Jr.
    Lyons, S. Kathleen
    McShea, Daniel W.
    Novack-Gottshall, Philip M.
    Smith, Felisa A.
    Spaeth, Paula
    Stempien, Jennifer A.
    Wang, Steve C.
    PHOTOSYNTHESIS RESEARCH, 2011, 107 (01) : 37 - 57
  • [30] Evolutionary rate of human tissue-specific genes are related with transposable element insertions
    Jin, Ping
    Qin, Sheng
    Chen, Xi
    Song, Yumei
    Li-Ling, Jesse
    Xu, Xiaofeng
    Ma, Fei
    GENETICA, 2012, 140 (10-12) : 513 - 523