Deep learning models for tuberculosis detection and infected region visualization in chest X-ray images

被引:22
作者
Sharma, Vinayak [1 ]
Nillmani [2 ]
Gupta, Sachin Kumar [1 ]
Shukla, Kaushal Kumar [3 ]
机构
[1] Shri Mata Vaishno Devi Univ Jammu & Kashmir, Sch Elect & Commun Engn, Katra, India
[2] Banaras Hindu Univ, Indian Inst Technol, Sch Biomed Engn, Varanasi, India
[3] Banaras Hindu Univ, Indian Inst Technol, Dept Comp Sci & Engn, Varanasi, India
来源
INTELLIGENT MEDICINE | 2024年 / 4卷 / 02期
关键词
Tuberculosis; Artificial intelligence; Deep learning; Segmentation; Classification; Chest X-ray; SEGMENTATION;
D O I
10.1016/j.imed.2023.06.001
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Objective Tuberculosis (TB) is among the most frequent causes of infectious -disease -related mortality. Despite being treatable by antibiotics, tuberculosis often goes misdiagnosed and untreated, especially in rural and lowresource areas. Chest X-rays are frequently used to aid diagnosis; however, this presents additional challenges because of the possibility of abnormal radiological appearance and a lack of radiologists in areas where the infection is most prevalent. Implementing deep -learning -based imaging techniques for computer -aided diagnosis has the potential to enable accurate diagnoses and lessen the burden on medical specialists. In the present work, we aimed to develop deep -learning -based segmentation and classification models for accurate and precise detection of tuberculosis in chest X-ray images, with visualization of infection using gradient -weighted class activation mapping (Grad -CAM) heatmaps. Methods First, we trained the UNet segmentation model using 704 chest X-ray radiographs taken from the Montgomery County and Shenzhen Hospital datasets. Next, we implemented the trained UNet model on 1,400 tuberculosis and control chest X-ray scans to segment the lung region. The images were taken from the National Institute of Allergy and Infectious Diseases (NIAID) TB portal program dataset. Then, we applied the deep learning Xception model to classify the segmented lung region into tuberculosis and normal classes. We further investigated the visualization capabilities of the model using Grad -CAM to view tuberculosis abnormalities in chest X-rays and discuss them from radiological perspectives. Results For segmentation by the UNet model, we achieved accuracy, Jaccard index, Dice coefficient, and area under the curve (AUC) values of 96.35%, 90.38%, 94.88%, and 0.99, respectively. For classification by the Xception model, we achieved classification accuracy, precision, recall, F1 -score, and AUC values of 99.29%, 99.30%, 99.29%, 99.29%, and 0.999, respectively. The Grad -CAM heatmap images from the tuberculosis class showed similar heatmap patterns, where lesions were primarily present in the upper part of the lungs. Conclusion The findings may verify our system's efficacy and superiority to clinician precision in tuberculosis diagnosis using chest X-rays and raise the possibility of a valuable setup, particularly in environments with a scarcity of radiological expertise.
引用
收藏
页码:104 / 113
页数:10
相关论文
共 60 条
[1]   AI-Assisted Tuberculosis Detection and Classification from Chest X-Rays Using a Deep Learning Normalization-Free Network Model [J].
Acharya, Vasundhara ;
Dhiman, Gaurav ;
Prakasha, Krishna ;
Bahadur, Pranshu ;
Choraria, Ankit ;
Sushobhitha, M. ;
Sowjanya, J. ;
Prabhu, Srikanth ;
Chadaga, Krishnaraj ;
Viriyasitavat, Wattana ;
Kautish, Sandeep .
COMPUTATIONAL INTELLIGENCE AND NEUROSCIENCE, 2022, 2022
[2]   Eight pruning deep learning models for low storage and high-speed COVID-19 computed tomography lung segmentation and heatmap-based lesion localization: A multicenter study using COVLIAS 2.0 [J].
Agarwal, Mohit ;
Agarwal, Sushant ;
Saba, Luca ;
Chabert, Gian Luca ;
Gupta, Suneet ;
Carriero, Alessandro ;
Pasche, Alessio ;
Danna, Pietro ;
Mehmedovic, Armin ;
Faa, Gavino ;
Shrivastava, Saurabh ;
Jain, Kanishka ;
Jain, Harsh ;
Jujaray, Tanay ;
Singh, Inder M. ;
Turk, Monika ;
Chadha, Paramjit S. ;
Johri, Amer M. ;
Khanna, Narendra N. ;
Mavrogeni, Sophie ;
Laird, John R. ;
Sobel, David W. ;
Miner, Martin ;
Balestrieri, Antonella ;
Sfikakis, Petros P. ;
Tsoulfas, George ;
Misra, Durga Prasanna ;
Agarwal, Vikas ;
Kitas, George D. ;
Teji, Jagjit S. ;
Al-Maini, Mustafa ;
Dhanjil, Surinder K. ;
Nicolaides, Andrew ;
Sharma, Aditya ;
Rathore, Vijay ;
Fatemi, Mostafa ;
Alizad, Azra ;
Krishnan, Pudukode R. ;
Yadav, Rajanikant R. ;
Nagy, Frence ;
Kincses, Zsigmond Tamas ;
Ruzsa, Zoltan ;
Naidu, Subbaram ;
Viskovic, Klaudija ;
Kalra, Manudeep K. ;
Suri, Jasjit S. .
COMPUTERS IN BIOLOGY AND MEDICINE, 2022, 146
[3]  
Ahsan M, 2019, 2019 IEEE INTERNATIONAL CONFERENCE ON ELECTRO INFORMATION TECHNOLOGY (EIT), P427, DOI [10.1109/EIT.2019.8833768, 10.1109/eit.2019.8833768]
[4]   Going Deep in Medical Image Analysis: Concepts, Methods, Challenges, and Future Directions [J].
Altaf, Fouzia ;
Islam, Syed M. S. ;
Akhtar, Naveed ;
Janjua, Naeem Khalid .
IEEE ACCESS, 2019, 7 :99540-99572
[5]  
[Anonymous], 2013, TUBERCULOSIS
[6]   Ensemble learning based automatic detection of tuberculosis in chest X-ray images using hybrid feature descriptors [J].
Ayaz, Muhammad ;
Shaukat, Furqan ;
Raja, Gulistan .
PHYSICAL AND ENGINEERING SCIENCES IN MEDICINE, 2021, 44 (01) :183-194
[7]   Applying deep learning in digital breast tomosynthesis for automatic breast cancer detection: A review [J].
Bai, Jun ;
Posner, Russell ;
Wang, Tianyu ;
Yang, Clifford ;
Nabavi, Sheida .
MEDICAL IMAGE ANALYSIS, 2021, 71
[8]   A deep learning based approach for automatic detection of COVID-19 cases using chest X-ray images [J].
Bhattacharyya, Abhijit ;
Bhaik, Divyanshu ;
Kumar, Sunil ;
Thakur, Prayas ;
Sharma, Rahul ;
Pachori, Ram Bilas .
BIOMEDICAL SIGNAL PROCESSING AND CONTROL, 2022, 71
[9]   Automatic detection of tuberculosis related abnormalities in Chest X-ray images using hierarchical feature extraction scheme [J].
Chandra, Tej Bahadur ;
Verma, Kesari ;
Singh, Bikesh Kumar ;
Jain, Deepak ;
Netam, Satyabhuwan Singh .
EXPERT SYSTEMS WITH APPLICATIONS, 2020, 158
[10]   Deep Learning: A Primer for Radiologists [J].
Chartrand, Gabriel ;
Cheng, Phillip M. ;
Vorontsov, Eugene ;
Drozdzal, Michal ;
Turcotte, Simon ;
Pal, Christopher J. ;
Kadoury, Samuel ;
Tang, An .
RADIOGRAPHICS, 2017, 37 (07) :2113-2131