A Novel Method to Identify Mild Cognitive Impairment Using Dynamic Spatio-Temporal Graph Neural Network

被引:0
作者
An, Xingwei [1 ]
Zhou, Yutao [1 ]
Di, Yang [1 ]
Han, Ying [2 ,3 ,4 ,5 ,6 ]
Ming, Dong [1 ]
机构
[1] Tianjin Univ, Acad Med Engn & Translat Med, Tianjin 300072, Peoples R China
[2] Hainan Univ, Sch Biomed Engn, Haikou 570228, Peoples R China
[3] Capital Med Univ, Xuanwu Hosp, Dept Neurol, Beijing 100053, Peoples R China
[4] Beijing Inst Brain Disorders, Ctr Alzheimers Dis, Beijing 100069, Peoples R China
[5] Natl Clin Res Ctr Geriatr Dis, Beijing 100053, Peoples R China
[6] Shenzhen Bay Lab, Inst Biomed Engn, Shenzhen 518118, Peoples R China
基金
中国国家自然科学基金;
关键词
Graph neural networks; Convolution; Brain modeling; Alzheimer's disease; Feature extraction; Functional magnetic resonance imaging; Deep learning; mild cognitive impairment; graph neural network; dynamic functional connectivity; FUNCTIONAL CONNECTIVITY; ALZHEIMERS-DISEASE; RS-FMRI; CLASSIFICATION; DEMENTIA; MCI;
D O I
10.1109/TNSRE.2024.3450443
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
Resting-state functional magnetic resonance imaging (rs-fMRI) has been widely used in the identification of mild cognitive impairment (MCI) research, MCI patients are relatively at a higher risk of progression to Alzheimer's disease (AD). However, almost machine learning and deep learning methods are rarely analyzed from the perspective of spatial structure and temporal dimension. In order to make full use of rs-fMRI data, this study constructed a dynamic spatiotemporal graph neural network model, which mainly includes three modules: temporal block, spatial block, and graph pooling block. Our proposed model can extract the BOLD signal of the subject's fMRI data and the spatial structure of functional connections between different brain regions, and improve the decision-making results of the model. In the study of AD, MCI and NC, the classification accuracy reached 83.78% outperforming previously reported, which manifested that our model could effectively learn spatiotemporal, and dynamic spatio-temporal method plays an important role in identifying different groups of subjects. In summary, this paper proposed an end-to-end dynamic spatio-temporal graph neural network model, which uses the information of the temporal dimension and spatial structure in rs-fMRI data, and achieves the improvement of the three classification performance among AD, MCI and NC.
引用
收藏
页码:3328 / 3337
页数:10
相关论文
共 44 条
  • [1] Machine learning for neuroirnaging with scikit-learn
    Abraham, Alexandre
    Pedregosa, Fabian
    Eickenberg, Michael
    Gervais, Philippe
    Mueller, Andreas
    Kossaifi, Jean
    Gramfort, Alexandre
    Thirion, Bertrand
    Varoquaux, Gael
    [J]. FRONTIERS IN NEUROINFORMATICS, 2014, 8
  • [2] Replicability of time-varying connectivity patterns in large resting state fMRI samples
    Abrol, Anees
    Damaraju, Eswar
    Miller, Robyn L.
    Stephen, Julia M.
    Claus, Eric D.
    Mayer, Andrew R.
    Calhoun, Vince D.
    [J]. NEUROIMAGE, 2017, 163 : 160 - 176
  • [3] A robust swarm intelligence-based feature selection model for neuro-fuzzy recognition of mild cognitive impairment from resting-state fMRI
    Anter, Ahmed M.
    Wei, Yichen
    Su, Jiahui
    Yuan, Yueming
    Lei, Beiying
    Duan, Gaoxiong
    Mai, Wei
    Nong, Xiucheng
    Yu, Bihan
    Li, Chong
    Fu, Zening
    Zhao, Lihua
    Deng, Demao
    Zhang, Zhiguo
    [J]. INFORMATION SCIENCES, 2019, 503 : 670 - 687
  • [4] A deep graph neural network architecture for modelling spatio-temporal dynamics in resting-state functional MRI data
    Azevedo, Tiago
    Campbell, Alexander
    Romero-Garcia, Rafael
    Passamonti, Luca
    Bethlehem, Richard A. I.
    Lio, Pietro
    Toschi, Nicola
    [J]. MEDICAL IMAGE ANALYSIS, 2022, 79
  • [5] GNEA: A Graph Neural Network with ELM Aggregator for Brain Network Classification
    Bi, Xin
    Liu, Zhixun
    He, Yao
    Zhao, Xiangguo
    Sun, Yongjiao
    Liu, Hao
    [J]. COMPLEXITY, 2020, 2020
  • [6] Fluctuating cognition in dementia with Lewy bodies and Alzheimer's disease is qualitatively distinct
    Bradshaw, J
    Saling, M
    Hopwood, M
    Anderson, V
    Brodtmann, A
    [J]. JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY, 2004, 75 (03) : 382 - 387
  • [7] Forecasting the global burden of Alzheimer's disease
    Brookmeyer, Ron
    Johnson, Elizabeth
    Ziegler-Graham, Kathryn
    Arrighi, H. Michael
    [J]. ALZHEIMERS & DEMENTIA, 2007, 3 (03) : 186 - 191
  • [8] Altered functional brain networks in amnestic mild cognitive impairment: a resting-state fMRI study
    Cai, Suping
    Chong, Tao
    Peng, Yanlin
    Shen, Wenyue
    Li, Jun
    von Deneen, Karen M.
    Huang, Liyu
    [J]. BRAIN IMAGING AND BEHAVIOR, 2017, 11 (03) : 619 - 631
  • [9] High-Order Resting-State Functional Connectivity Network for MCI Classification
    Chen, Xiaobo
    Zhang, Han
    Gao, Yue
    Wee, Chong-Yaw
    Li, Gang
    Shen, Dinggang
    [J]. HUMAN BRAIN MAPPING, 2016, 37 (09) : 3282 - 3296
  • [10] Age-Related Decline in the Variation of Dynamic Functional Connectivity: A Resting State Analysis
    Chen, Yuanyuan
    Wang, Weiwei
    Zhao, Xin
    Sha, Miao
    Liu, Ya'nan
    Zhang, Xiong
    Ma, Jianguo
    Ni, Hongyan
    Ming, Dong
    [J]. FRONTIERS IN AGING NEUROSCIENCE, 2017, 9