First draft genome sequence of a Pectobacterium polaris strain isolated in South Africa from potato tuber affected by soft rot

被引：0

作者：

Dapuliga, Christiana C. ^{[1
]}

Claussen, Maike ^{[1
]}

Schmidt, Stefan ^{[1
]}

机构：

[1] Univ KwaZulu Natal, Sch Life Sci, Discipline Microbiol, Pietermaritzburg, South Africa

来源：

MICROBIOLOGY RESOURCE ANNOUNCEMENTS | 2024年

基金：

新加坡国家研究基金会;

关键词：

Pectobacterium polaris; soft rot; potato; South Africa; DATABASE;

D O I：

10.1128/mra.00691-24

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

A phytopathogenic strain of Pectobacterium polaris (designated SRB2) was isolated for the first time in South Africa from a potato tuber affected by soft rot. The draft genome of strain SRB2 encodes various plant cell wall-degrading enzymes and genes associated with biofilm formation and virulence. Antibiotic resistance genes were not detected.

引用

页数：4

共 29 条

[1] First draft genome sequence of a Pectobacterium polaris strain isolated in South Africa from potato tuber affectedaffected by soft rot
Dapuliga, Christiana C.
Claussen, Maike
Schmidt, Stefan
MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2024, 13 (10):
[2] First Report of Pectobacterium polaris Causing Soft Rot and Blackleg of Potato in Russia
Voronina, M. V.
Lukianova, A. A.
Shneider, M. M.
Korzhenkov, A. A.
Toschakov, S. V.
Miroshnikov, K. A.
Vasiliev, D. M.
Ignatov, A. N.
PLANT DISEASE, 2021, 105 (06)
[3] Molecular typing of Pectobacterium carotovorum isolated from potato tuber soft rot in Morocco
Meriam Terta
Souad Azelmat
Rajaa Ait M’hand
El Hassan Achbani
Mustapha Barakate
François Bouteau
Moulay Mustapha Ennaji
Annals of Microbiology, 2012, 62 : 1411 - 1417
[4] Molecular typing of Pectobacterium carotovorum isolated from potato tuber soft rot in Morocco
Terta, Meriam
Azelmat, Souad
M'hand, Rajaa Ait
Achbani, El Hassan
Barakate, Mustapha
Bouteau, Francois
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ANNALS OF MICROBIOLOGY, 2012, 62 (04) : 1411 - 1417
[5] Draft genome sequence of a clinical Acinetobacter haemolyticus isolate from South Africa
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Founou, Luria Leslie
Allam, Mushal
Ismail, Arshad
Essack, Sabiha Yusuf
JOURNAL OF GLOBAL ANTIMICROBIAL RESISTANCE, 2020, 20 : 16 - 17
[6] Multilocus sequence and phenotypic analysis of Pectobacterium and Dickeya type strains for identification of soft rot Pectobacteriaceae from symptomatic potato stems and tubers in Pennsylvania
Mainello-Land, Amanda M.
Bibi, Shaheen
Gugino, Beth
Bull, Carolee T.
SYSTEMATIC AND APPLIED MICROBIOLOGY, 2024, 47 (01)
[7] Genome sequence of a clinical Salmonella Enteritidis sequence type 11 strain from South Africa
Rule, Roxanne
Said, Mohamed
Mbelle, Nontombi
Sekyere, John Osei
JOURNAL OF GLOBAL ANTIMICROBIAL RESISTANCE, 2019, 19 : 164 - 166
[8] The complete genome sequence of Pantoea agglomerans NBBC-01, isolated from rot potato tubers
Wang, Yueying
Chen, Ling
Liu, Fang
Zhang, Zhigang
Zhang, Fei
Wang, Kaimei
Fang, Wei
MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2023, 12 (11):
[9] Infection by a coronatine-producing strain of Pectobacterium cacticidum isolated from sunflower plants in Mexico is characterized by soft rot and chlorosis
Humberto Valenzuela-Soto, Jose
David Maldonado-Bonilla, Luis
Hernandez-Guzman, Gustavo
Rincon-Enriquez, Gabriel
Angelica Martinez-Gallardo, Norma
Ramirez-Chavez, Enrique
Cisneros Hernandez, Ismael
Luis Hernandez-Flores, Jose
Paul Delano-Frier, John
JOURNAL OF GENERAL PLANT PATHOLOGY, 2015, 81 (05) : 368 - 381
[10] Infection by a coronatine-producing strain of Pectobacterium cacticidum isolated from sunflower plants in Mexico is characterized by soft rot and chlorosis
José Humberto Valenzuela-Soto
Luis David Maldonado-Bonilla
Gustavo Hernández-Guzmán
Gabriel Rincón-Enríquez
Norma Angélica Martínez-Gallardo
Enrique Ramírez-Chávez
Ismael Cisneros Hernández
José Luis Hernández-Flores
John Paul Délano-Frier
Journal of General Plant Pathology, 2015, 81 : 368 - 381

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