The complete chloroplast genome of Taraxacum albidum (Asteraceae), a Japanese endemic dandelion

被引:0
作者
Mouri, Haruka [1 ]
Tatsumi, Mizuki [2 ]
Nishino, Takako [3 ]
Suzuki, Takeshi [4 ]
Morita, Tatsuyoshi [5 ]
Ito, Motomi [6 ]
Iwasaki, Takaya [1 ]
机构
[1] Ochanomizu Univ, Grad Sch Humanities & Sci, 2-1-1 Otsuka,Bunkyo Ku, Tokyo 1128610, Japan
[2] Reg Environm Planning Inc, Sapporo, Japan
[3] Osaka Metropolitan Univ, Grad Sch Sci, Sakai, Japan
[4] Univ Hyogo, Inst Nat & Environm Sci, Sanda, Japan
[5] Niigata Univ, Fac Educ, Niigata, Japan
[6] Univ Tokyo, Grad Sch Arts & Sci, Tokyo, Japan
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2024年 / 9卷 / 08期
关键词
Chloroplast genome; Asteraceae; Taraxacum albidum; dandelion; Japan; SEQUENCE; EVOLUTION; DNA;
D O I
10.1080/23802359.2024.2387258
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Taraxacum albidum, a perennial herb of the Asteraceae family, exhibits both tetraploid and pentaploid in Japan. This study sequenced and characterized the complete chloroplast genome of T. albidum, revealing a 151,451 bp sequence with a typical quadripartite structure, comprising one large single-copy (LSC) region of 84,052 bp, one small single-copy (SSC) region of 18,541 bp, and two inverted repeat (IR) regions, IRa and IRb, each 24,429 bp in length. The chloroplast genome, excluding duplicates, contained 113 unique genes, including 79 protein-coding genes, 30 transfer RNA genes, and four ribosomal RNA genes. The GC content of this genome was 37.7%. Phylogenetic analysis revealed that T. albidum is most closely related to T. mongolicum, with the chloroplast genome sequences being nearly identical, differing by only one nucleotide. These findings suggest that the maternal lineage of T. albidum likely originates from T. mongolicum or its closely related species.
引用
收藏
页码:1015 / 1019
页数:5
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