Two Distinct Maternal Lineages of Threespine Stickleback (Gasterosteus aculeatus) in a Small Norwegian Subarctic Lake

被引:1
作者
Karlsen, Bard Ove [1 ]
Adhikari, Dhurba [2 ]
Jorgensen, Tor Erik [2 ]
Hanssen, Ida Klykken [2 ]
Moum, Truls Borg [2 ]
Nordeide, Jarle Tryti [2 ]
Johansen, Steinar Daae [2 ]
机构
[1] Nordland Hosp Trust, Dept Lab Med, N-8092 Bodo, Norway
[2] Nord Univ, Fac Biosci & Aquaculture, Genom Div, N-8049 Bodo, Norway
关键词
genetic differentiation; mitogenome; pelvic spine; PoolSeq; phylogeny; second colonization; threespine stickleback; Gasterosteus aculeatus; 3-SPINED STICKLEBACK; PELVIC REDUCTION; POPULATIONS; EVOLUTION; PHYLOGEOGRAPHY;
D O I
10.3390/fishes9070285
中图分类号
S9 [水产、渔业];
学科分类号
0908 ;
摘要
A subarctic Norwegian watercourse is known for its population of threespine sticklebacks (Gasterosteus aculeatus Linnaeus 1758) with unusual pelvic spine polymorphism; the upper lake contains a mixture of specimens that are normal-spined, asymmetric-spined, and spineless. In contrast, the downstream lakes and the nearby marine site contain only the normal spined morph. We investigated the maternal-line genetic structure in the watercourse using mitogenomics. A total of 242 sticklebacks representing two lakes and a marine site were assessed based on individual and pooled DNA sequencing. While two distinct mitogenome clades were detected in the upper lake (Lake Storvatnet), only one of these clades was present in the downstream lake. The marine site pooled DNA sample, however, contained several mitogenome haplotypes. We present mitogenome sequence features that include gene-specific single nucleotide polymorphisms, molecular phylogeny, and genetic differentiation assessments based on pairwise comparisons of pooled population samples from each site. The Lake Storvatnet mitogenomes belong to two distinct Euro-North American (ENA) clades; one of the ancestral lineages likely corresponds to the original maternal lineage in the watercourse, and the other was introduced more recently. We hypothesize that the second invader carried nuclear genomic features responsible for the observed present-day pelvic spine polymorphism in Lake Storvatnet.
引用
收藏
页数:13
相关论文
共 28 条
[1]   Pitx1 Enhancer Variants in Spined and Spine-Reduced Subarctic European Sticklebacks [J].
Adhikari, Dhurba ;
Hanssen, Ida K. K. ;
Johansen, Steinar D. D. ;
Moum, Truls B. B. ;
Nordeide, Jarle T. T. .
FISHES, 2023, 8 (03)
[2]   Freshwater Colonization, Adaptation, and Genomic Divergence in Threespine Stickleback [J].
Aguirre, Windsor E. ;
Reid, Kerry ;
Rivera, Jessica ;
Heins, David C. ;
Veeramah, Krishna R. ;
Bell, Michael A. .
INTEGRATIVE AND COMPARATIVE BIOLOGY, 2022, 62 (02) :388-405
[3]   Extreme intraspecific divergence in mitochondrial haplotypes makes the threespine stickleback fish an emerging evolutionary mutant model for mito-nuclear interactions [J].
Beck, Emily A. A. ;
Bassham, Susan ;
Cresko, William A. A. .
FRONTIERS IN GENETICS, 2022, 13
[4]   Animal mitochondrial genomes [J].
Boore, JL .
NUCLEIC ACIDS RESEARCH, 1999, 27 (08) :1767-1780
[5]   Adaptive Evolution of Pelvic Reduction in Sticklebacks by Recurrent Deletion of a Pitx1 Enhancer [J].
Chan, Yingguang Frank ;
Marks, Melissa E. ;
Jones, Felicity C. ;
Villarreal, Guadalupe, Jr. ;
Shapiro, Michael D. ;
Brady, Shannon D. ;
Southwick, Audrey M. ;
Absher, Devin M. ;
Grimwood, Jane ;
Schmutz, Jeremy ;
Myers, Richard M. ;
Petrov, Dmitri ;
Jonsson, Bjarni ;
Schluter, Dolph ;
Bell, Michael A. ;
Kingsley, David M. .
SCIENCE, 2010, 327 (5963) :302-305
[6]   Phylogeography of isolated freshwater three-spined stickleback Gasterosteus aculeatus populations in the Adriatic Sea basin [J].
DeFaveri, J. ;
Zanella, L. N. ;
Zanella, D. ;
Mrakovcic, M. ;
Merila, J. .
JOURNAL OF FISH BIOLOGY, 2012, 80 (01) :61-85
[7]   The mitochondrial transcriptome of the anglerfishLophius piscatorius [J].
Dubin, Arseny ;
Jorgensen, Tor Erik ;
Jakt, Lars Martin ;
Johansen, Steinar Daae .
BMC RESEARCH NOTES, 2019, 12 (01)
[8]   Complete vertebrate mitogenomes reveal widespread repeats and gene duplications [J].
Formenti, Giulio ;
Rhie, Arang ;
Balacco, Jennifer ;
Haase, Bettina ;
Mountcastle, Jacquelyn ;
Fedrigo, Olivier ;
Brown, Samara ;
Capodiferro, Marco Rosario ;
Al-Ajli, Farooq O. ;
Ambrosini, Roberto ;
Houde, Peter ;
Koren, Sergey ;
Oliver, Karen ;
Smith, Michelle ;
Skelton, Jason ;
Betteridge, Emma ;
Dolucan, Jale ;
Corton, Craig ;
Bista, Iliana ;
Torrance, James ;
Tracey, Alan ;
Wood, Jonathan ;
Uliano-Silva, Marcela ;
Howe, Kerstin ;
McCarthy, Shane ;
Winkler, Sylke ;
Kwak, Woori ;
Korlach, Jonas ;
Fungtammasan, Arkarachai ;
Fordham, Daniel ;
Costa, Vania ;
Mayes, Simon ;
Chiara, Matteo ;
Horner, David S. ;
Myers, Eugene ;
Durbin, Richard ;
Achilli, Alessandro ;
Braun, Edward L. ;
Phillippy, Adam M. ;
Jarvis, Erich D. .
GENOME BIOLOGY, 2021, 22 (01)
[9]   THE RELATIONSHIP BETWEEN THE CONCEPTS OF GENETIC DIVERSITY AND DIFFERENTIATION [J].
GREGORIUS, HR .
THEORETICAL AND APPLIED GENETICS, 1987, 74 (03) :397-401
[10]   FUNDAMENTAL CONCEPTS IN GENETICS Genetics in geographically structured populations: defining, estimating and interpreting FST [J].
Holsinger, Kent E. ;
Weir, Bruce S. .
NATURE REVIEWS GENETICS, 2009, 10 (09) :639-650