GABAA receptors (gamma-aminobutyric acid-gated receptors type A; GABA(A)Rs), the major structural and functional postsynaptic components of inhibitory synapses in the mammalian brain, belong to a family of GABA-gated Cl-/HCO3- ion channels. They are assembled as heteropentamers from a family of subunits including: alpha (1-6), beta(1-3), gamma(1-3), delta, epsilon, pi, theta and rho(1-3). GABA(A)Rs together with the postsynaptic adhesion protein Neuroligin 2 (NL2) and many other pre- and post-synaptic proteins guide the initiation and functional maturation of inhibitory GABAergic synapses. This study examined how GABA(A)Rs and NL2 interact with each other to initiate the formation of synapses. Two functionally distinct GABAAR subtypes, the synaptic type alpha 2 beta 2 gamma 2-GABA(A)Rs versus extrasynaptic type alpha 4 beta 3 delta-GABA(A)Rs were expressed in HEK293 cells alone or together with NL2 and co-cultured with striatal GABAergic medium spiny neurons to enable innervation of HEK293 cells by GABAergic axons. When expressed alone, only the synaptic alpha 2 beta 2 gamma 2-GABA(A)Rs induced innervation of HEK293 cells. However, when GABA(A)Rs were co-expressed with NL2, the effect on synapse formation exceeded the individual effects of these proteins indicating a synergistic interaction, with alpha 2 beta 2 gamma 2-GABA(A)R/NL2 showing a significantly greater synaptogenic activity than alpha 4 beta 3 delta-GABA(A)R/NL2 or NL2 alone. To investigate the molecular basis of this interaction, different combinations of GABA(A)R subunits and NL2 were co-expressed, and the degree of innervation and synaptic activity assessed, revealing a key role of the gamma 2 subunit. In biochemical assays, the interaction between NL2 and alpha 2 beta 2 gamma 2-GABA(A)R was established and mapped to the large intracellular domain of the gamma 2 subunit.