Automated MRI-based segmentation of intracranial arterial calcification by restricting feature complexity

被引:0
作者
Wang, Xin [1 ]
Canton, Gador [2 ]
Guo, Yin [3 ]
Zhang, Kaiyu [3 ]
Akcicek, Halit [4 ]
Akcicek, Ebru Yaman [4 ]
Hatsukami, Thomas [5 ]
Zhang, Jin [6 ]
Sun, Beibei [6 ]
Zhao, Huilin [6 ]
Zhou, Yan [6 ]
Shapiro, Linda [7 ]
Mossa-Basha, Mahmud [2 ]
Yuan, Chun [2 ,4 ]
Balu, Niranjan [2 ]
机构
[1] Univ Washington, Dept Elect & Comp Engn, Seattle, WA USA
[2] Univ Washington, Dept Radiol, Vasc Imaging Lab, Room 124,850 Republican St, Seattle, WA 98195 USA
[3] Univ Washington, Dept Bioengn, Seattle, WA USA
[4] Univ Utah, Dept Radiol & Imaging Sci, Salt Lake City, UT USA
[5] Univ Washington, Dept Surg, Seattle, WA USA
[6] Shanghai Jiao Tong Univ, Sch Med, Renji Hosp, Dept Radiol, Shanghai, Peoples R China
[7] Univ Washington, Paul G Allen Sch Comp Sci & Engn, Seattle, WA USA
基金
美国国家卫生研究院;
关键词
calcification segmentation; deep learning; information bottleneck; intracranial arteries; variational autoencoders; SIMULTANEOUS NONCONTRAST ANGIOGRAPHY; EXPERT CONSENSUS RECOMMENDATIONS; COMPUTED-TOMOGRAPHY; ATHEROSCLEROSIS; STROKE;
D O I
10.1002/mrm.30283
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
PurposeTo develop an automated deep learning model for MRI-based segmentation and detection of intracranial arterial calcification.MethodsA novel deep learning model under the variational autoencoder framework was developed. A theoretically grounded dissimilarity loss was proposed to refine network features extracted from MRI and restrict their complexity, enabling the model to learn more generalizable MR features that enhance segmentation accuracy and robustness for detecting calcification on MRI.ResultsThe proposed method was compared with nine baseline methods on a dataset of 113 subjects and showed superior performance (for segmentation, Dice similarity coefficient: 0.620, area under precision-recall curve [PR-AUC]: 0.660, 95% Hausdorff Distance: 0.848 mm, Average Symmetric Surface Distance: 0.692 mm; for slice-wise detection, F1 score: 0.823, recall: 0.764, precision: 0.892, PR-AUC: 0.853). For clinical needs, statistical tests confirmed agreement between the true calcification volumes and predicted values using the proposed approach. Various MR sequences, namely T1, time-of-flight, and SNAP, were assessed as inputs to the model, and SNAP provided unique and essential information pertaining to calcification structures.ConclusionThe proposed deep learning model with a dissimilarity loss to reduce feature complexity effectively improves MRI-based identification of intracranial arterial calcification. It could help establish a more comprehensive and powerful pipeline for vascular image analysis on MRI.
引用
收藏
页码:384 / 396
页数:13
相关论文
共 46 条
  • [1] Alemi Alexander A, 2017, INT C LEARNING REPRE
  • [2] Media Calcification and Intima Calcification Are Distinct Entities in Chronic Kidney Disease
    Amann, Kerstin
    [J]. CLINICAL JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY, 2008, 3 (06): : 1599 - 1605
  • [3] Intracranial Atherosclerosis Current Concepts
    Arenillas, Juan F.
    [J]. STROKE, 2011, 42 (01) : S20 - S23
  • [4] Automated Segmentation and Volume Measurement of Intracranial Internal Carotid Artery Calcification at Noncontrast CT
    Bortsova, Gerda
    Bos, Daniel
    Dubost, Florian
    Vernooij, Meike W.
    Ikram, M. Kamran
    van Tulder, Gijs
    de Bruijne, Marleen
    [J]. RADIOLOGY-ARTIFICIAL INTELLIGENCE, 2021, 3 (05)
  • [5] Bos D., 2012, Alzheimers Dement, V8, pS104, DOI DOI 10.1016/J.JALZ.2012.01.008
  • [6] Intracranial Carotid Artery Atherosclerosis and the Risk of Stroke in Whites The Rotterdam Study
    Bos, Daniel
    Portegies, Marileen L. P.
    van der Lugt, Aad
    Bos, Michiel J.
    Koudstaal, Peter J.
    Hofman, Albert
    Krestin, Gabriel P.
    Franco, Oscar H.
    Vernooij, Meike W.
    Ikram, M. Arfan
    [J]. JAMA NEUROLOGY, 2014, 71 (04) : 405 - 411
  • [7] Current concepts - Computed tomography - An increasing source of radiation exposure
    Brenner, David J.
    Hall, Eric J.
    [J]. NEW ENGLAND JOURNAL OF MEDICINE, 2007, 357 (22) : 2277 - 2284
  • [8] Presence of Intracranial Artery Calcification Is Associated With Mortality and Vascular Events in Patients With Ischemic Stroke After Hospital Discharge A Cohort Study
    Bugnicourt, Jean-Marc
    Leclercq, Claire
    Chillon, Jean-Marc
    Diouf, Momar
    Deramond, Herve
    Canaple, Sandrine
    Lamy, Chantal
    Massy, Ziad A.
    Godefroy, Olivier
    [J]. STROKE, 2011, 42 (12) : 3447 - U198
  • [9] Domain-Specific Batch Normalization for Unsupervised Domain Adaptation
    Chang, Woong-Gi
    You, Tackgeun
    Seo, Seonguk
    Kwak, Suha
    Han, Bohyung
    [J]. 2019 IEEE/CVF CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION (CVPR 2019), 2019, : 7346 - 7354
  • [10] Development of a quantitative intracranial vascular features extraction tool on 3D MRA using semiautomated open-curve active contour vessel tracing
    Chen, Li
    Mossa-Basha, Mahmud
    Balu, Niranjan
    Canton, Gador
    Sun, Jie
    Pimentel, Kristi
    Hatsukami, Thomas S.
    Hwang, Jenq-Neng
    Yuan, Chun
    [J]. MAGNETIC RESONANCE IN MEDICINE, 2018, 79 (06) : 3229 - 3238