Breast cancer promotes the expression of neurotransmitter receptor related gene groups and image simulation of prognosis model

被引:3
作者
Qin, Shuting [1 ]
Lu, Linjie [2 ]
Tang, Xi [1 ]
Huang, Shenli [1 ]
Guo, Zhongxin [3 ]
Tan, Guohe [3 ,4 ,5 ,6 ,7 ]
机构
[1] Guangxi Med Univ, Liuzhou Peoples Hosp, Dept Breast & Thyroid Surg, Liuzhou, Guangxi, Peoples R China
[2] Guangxi Med Univ, Canc Hosp, Dept Breast Surg, Nanning, Guangxi, Peoples R China
[3] Guangxi Med Univ, Inst Neurosci, Sch Basic Med Sci, Dept Human Anat, Nanning, Guangxi, Peoples R China
[4] Guangxi Med Univ, Sch Basic Med Sci, Dept Human Anat, Guangxi Key Lab Brain Sci, Nanning, Guangxi, Peoples R China
[5] Chinese Minist Educ, Key Lab Longev & Aging Related Dis, Key Lab Basic Res Brain Funct & Dis, Guangxi Hlth Commiss, Nanning, Guangxi, Peoples R China
[6] China ASEAN Res Ctr Innovat & Dev Brain Sci, Nanning, Guangxi, Peoples R China
[7] Collaborat Innovat Ctr Regenerat Med & Med BioReso, Guangxi Key Lab Regenerat Med, Nanning, Guangxi, Peoples R China
来源
SLAS TECHNOLOGY | 2024年 / 29卷 / 05期
关键词
Breast Cancer; Neurotransmitter receptors; Gene expression; Immune infiltration; Prognostic models; Functional enrichment;
D O I
10.1016/j.slast.2024.100183
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Breast cancer (BC), a prevalent and severe malignancy, detrimentally affects women globally. Its prognostic implications are profoundly influenced by gene expression patterns. This study retrieved 509 BCE-associated oncogenes and 1,012 neurotransmitter receptor-related genes from the GSEA and KEGG databases, intersecting to identify 98 relevant genes. Clinical and transcriptomic expression data related to BC were downloaded from the TCGA, and differential genes were identified based on an FDR value <0.05 & |log2FC| >= 0.585. Univariate analysis of these genes revealed that high expression of NSF and low expression of HRAS, KIF17, and RPS6KA1 are closely associated with BC survival prognosis. A prognostic model constructed for these four genes demonstrated significant prognostic relevance for BC-TCGA patients (P < 0.001). Subsequently, an immunofunctional analysis of the BC oncogene-neurotransmitter receptor-related gene cluster revealed the involvement of immune cells such as T cells CD8, T cells CD4 memory resting, and Macrophages M2. Further analysis indicated that immune functions were primarily concentrated in APC_co_inhibition, APC_co_stimulation, CCR, and Check-point, among others. Lastly, a prognostic nomogram model was established, and ROC curve analysis revealed that the nomogram is a vital indicator for assessing BC prognosis, with 1-year, 3-year, and 5-year survival rates of 0.981, 0.897, and 0.802, respectively. This model demonstrates high calibration, clinical utility, and predictive capability, promising to offer an effective preliminary tool for clinical diagnostics.
引用
收藏
页数:13
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