Polygenic risk scores for nicotine use and family history of smoking are associated with smoking behaviour

被引:0
作者
Foo, Jerome C. [1 ,2 ,3 ,4 ]
Voelker, Maja P. [1 ]
Streit, Fabian [1 ,5 ,6 ,7 ]
Frank, Josef [1 ]
Zacharias, Norman [8 ,9 ]
Zillich, Lea [1 ,7 ,10 ,11 ,12 ]
Sirignano, Lea [1 ]
Nuernberg, Peter [13 ,14 ]
Wienker, Thomas F. [15 ]
Wagner, Michael [16 ,17 ]
Noethen, Markus M. [18 ]
Nothnagel, Michael [19 ]
Walter, Henrik [20 ]
Lenz, Bernd [19 ]
Spanagel, Rainer [2 ]
Kiefer, Falk [21 ]
Winterer, Georg [22 ,23 ,24 ,25 ]
Rietschel, Marcella [1 ]
Witt, Stephanie H. [1 ,7 ]
机构
[1] Heidelberg Univ, Cent Inst Mental Hlth, Med Fac Mannheim, Dept Genet Epidemiol Psychiat, Mannheim, Germany
[2] Heidelberg Univ, Inst Psychopharmacol, Cent Inst Mental Hlth, Med Fac Mannheim, Mannheim, Germany
[3] Univ Alberta, Coll Hlth Sci, Dept Psychiat, Edmonton, AB, Canada
[4] Univ Alberta, Neurosci & Mental Hlth Inst, Edmonton, AB, Canada
[5] Heidelberg Univ, Cent Inst Mental Hlth, Med Fac Mannheim, Dept Psychiat & Psychotherapy, Mannheim, Germany
[6] Heidelberg Univ, Hector Inst Artificial Intelligence Psychiat, Cent Inst Mental Hlth, Med Fac Mannheim, Mannheim, Germany
[7] German Ctr Mental Hlth DZPG, Partner Site Mannheim Heidelberg Ulm, Mannheim, Germany
[8] Humboldt Univ, Charite Univ Med Berlin, Freie Univ Berlin, Dept Otorhinolaryngol Head & Neck Surg, Berlin, Germany
[9] Berlin Inst Hlth, Campus Benjamin Franklin, Berlin, Germany
[10] Heidelberg Univ, Cent Inst Mental Hlth, Med Fac Mannheim, Dept Translat Brain Res, Mannheim, Germany
[11] HITBR Hector Inst Translat Brain Res gGmbH, Mannheim, Germany
[12] German Canc Res Ctr, Heidelberg, Germany
[13] Univ Cologne, Fac Med, Cologne Ctr Genom CCG, D-50931 Cologne, Germany
[14] Univ Hosp Cologne, D-50931 Cologne, Germany
[15] Max Planck Inst Mol Genet, Dept Mol Human Genet, Berlin, Germany
[16] Univ Hosp Bonn, Dept Psychiat & Psychotherapy, Bonn, Germany
[17] Univ Hosp Bonn, Dept Neurodegenerat Dis & Geriatr Psychiat, Bonn, Germany
[18] Univ Hosp Bonn, Inst Human Genet, Bonn, Germany
[19] Univ Cologne, Cologne Ctr Genom, Dept Stat Genet & Bioinformat, Cologne, Germany
[20] Charite Univ Med Berlin, Dept Psychiat & Psychotherapy, Div Mind & Brain Res, Berlin, Germany
[21] Heidelberg Univ, Cent Inst Mental Hlth, Med Fac Mannheim, Dept Addict Behav & Addict Med, Mannheim, Germany
[22] Charite Univ Med Berlin, Dept Anesthesiol & Intens Care Med, Campus Virchow Klinikum, Berlin, Germany
[23] Charite Univ Med Berlin, Campus Charite Mitte, Berlin, Germany
[24] Pharmaimage Biomarker Solut GmbH, Berlin, Germany
[25] PI Hlth Solut GmbH, Berlin, Germany
关键词
INITIATION; TOBACCO;
D O I
10.1016/j.drugalcdep.2024.112415
中图分类号
R194 [卫生标准、卫生检查、医药管理];
学科分类号
摘要
Introduction:<bold> </bold>Formal genetics studies show that smoking is influenced by genetic factors; exploring this on the molecular level can offer deeper insight into the etiology of smoking behaviours. Methods:<bold> </bold>Summary statistics from the latest wave of the GWAS and Sequencing Consortium of Alcohol and Nicotine (GSCAN) were used to calculate polygenic risk scores (PRS) in a sample of similar to 2200 individuals who smoke/individuals who never smoked. The associations of smoking status with PRS for Smoking Initiation (i.e., Lifetime Smoking; SI-PRS), and Fagerstrom Test for Nicotine Dependence (FTND) score with PRS for Cigarettes per Day (CpD-PRS) were examined, as were distinct/additive effects of parental smoking on smoking status. Results:<bold> </bold>SI-PRS explained 10.56% of variance (Nagelkerke-R-2) in smoking status (p=6.45x10(-30)). In individuals who smoke, CpD-PRS was associated with FTND score (R-2=5.03%, p=1.88x10(-12)). Parental smoking alone explained R-2=3.06% (p=2.43x10(-12)) of smoking status, and 0.96% when added to the most informative SI-PRS model (total R-2=11.52%). Conclusion:<bold> </bold>These results show the potential utility of molecular genetic data for research investigating smoking prevention. The fact that PRS explains more variance than family history highlights progress from formal to molecular genetics; the partial overlap and increased predictive value when using both suggests the importance of combining these approaches.
引用
收藏
页数:5
相关论文
共 27 条
  • [1] American Psychiatric Association, 1980, Diagnostic and Statistical Manual of Mental Disorders, V3rd ed
  • [2] Trends in the Genetic Influences on Smoking
    Boardman, Jason D.
    Blalock, Casey L.
    Pampel, Fred C.
    [J]. JOURNAL OF HEALTH AND SOCIAL BEHAVIOR, 2010, 51 (01) : 108 - 123
  • [3] Studying the Utility of Using Genetics to Predict Smoking-Related Outcomes in a Population-Based Study and a Selected Cohort
    Bray, Michael J.
    Chen, Li-Shiun
    Fox, Louis
    Ma, Yinjiao
    Grucza, Richard A.
    Hartz, Sarah M.
    Culverhouse, Robert C.
    Saccone, Nancy L.
    Hancock, Dana B.
    Johnson, Eric O.
    McKay, James D.
    Baker, Timothy B.
    Bierut, Laura J.
    [J]. NICOTINE & TOBACCO RESEARCH, 2021, 23 (12) : 2110 - 2116
  • [4] Second-generation PLINK: rising to the challenge of larger and richer datasets
    Chang, Christopher C.
    Chow, Carson C.
    Tellier, Laurent C. A. M.
    Vattikuti, Shashaank
    Purcell, Shaun M.
    Lee, James J.
    [J]. GIGASCIENCE, 2015, 4
  • [5] Tutorial: a guide to performing polygenic risk score analyses
    Choi, Shing Wan
    Mak, Timothy Shin-Heng
    O'Reilly, Paul F.
    [J]. NATURE PROTOCOLS, 2020, 15 (09) : 2759 - 2772
  • [6] PRSice-2: Polygenic Risk Score software for biobank-scale data
    Choi, Shing Wan
    O'Reilly, Paul F.
    [J]. GIGASCIENCE, 2019, 8 (07):
  • [7] Next-generation genotype imputation service and methods
    Das, Sayantan
    Forer, Lukas
    Schoenherr, Sebastian
    Sidore, Carlo
    Locke, Adam E.
    Kwong, Alan
    Vrieze, Scott I.
    Chew, Emily Y.
    Levy, Shawn
    McGue, Matt
    Schlessinger, David
    Stambolian, Dwight
    Loh, Po-Ru
    Iacono, William G.
    Swaroop, Anand
    Scott, Laura J.
    Cucca, Francesco
    Kronenberg, Florian
    Boehnke, Michael
    Abecasis, Goncalo R.
    Fuchsberger, Christian
    [J]. NATURE GENETICS, 2016, 48 (10) : 1284 - 1287
  • [8] Alcohol and nicotine polygenic scores are associated with the development of alcohol and nicotine use problems from adolescence to young adulthood
    Deak, Joseph D.
    Clark, D. Angus
    Liu, Mengzhen
    Schaefer, Jonathan D.
    Jang, Seon Kyeong
    Durbin, C. Emily
    Iacono, William G.
    McGue, Matt
    Vrieze, Scott, I
    Hicks, Brian M.
    [J]. ADDICTION, 2022, 117 (04) : 1117 - 1127
  • [9] Stability in effects of different smoking-related polygenic risk scores over age and smoking phenotypes
    Deutsch, Arielle R.
    Selya, Arielle S.
    [J]. DRUG AND ALCOHOL DEPENDENCE, 2020, 214
  • [10] Analysis of polygenic risk score usage and performance in diverse human populations
    Duncan, L.
    Shen, H.
    Gelaye, B.
    Meijsen, J.
    Ressler, K.
    Feldman, M.
    Peterson, R.
    Domingue, B.
    [J]. NATURE COMMUNICATIONS, 2019, 10 (1)