FT-IR, UV-Vis, density functional theory and molecular docking studies on 3,7,11,15-Tetramethyl-2hexadecen-1-ol

被引:0
作者
Kayashrini, S. [1 ]
Rajesh, P. [1 ]
Dhanalakshmi, E. [1 ]
Kesavan, M. [2 ]
Prabhaharan, M. [3 ]
Al Farraj, Dunia A. [4 ]
Elshikh, Mohamed S. [4 ]
机构
[1] Vels Inst Sci & Technol & Adv Studies, Sch Basic Sci, Dept Phys, Chennai 600117, Tamil Nadu, India
[2] Interdisciplinary Inst Indian Syst Med, SRM Inst Sci & Technol, Chennai 603203, Tamil Nadu, India
[3] Saveetha Inst Med & Tech Sci SIMATS, Saveetha Sch Engn, Dept Phys, Chennai 602105, Tamil Nadu, India
[4] King Saud Univ, Coll Sci, Dept Bot & Microbiol, PO 2455, Riyadh 11451, Saudi Arabia
关键词
3TMH; DFT; Topological properties; Molecular docking; Anticancer; VIBRATIONAL ANALYSIS; DFT CALCULATIONS; AB-INITIO; 1ST-ORDER HYPERPOLARIZABILITY; LUMO ANALYSIS; NBO ANALYSIS; HOMO-LUMO; RAMAN; SPECTRA; MEP;
D O I
10.1016/j.molstruc.2024.139600
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The organic molecule of 3,7,11,15-Tetramethyl-2-hexadecen-1-ol is frequently present in plant chlorophyll pigment. The title compound possesses antimicrobial, antibacterial, antioxidant, anti-inflammatory, and anticancer characteristics. The 3TMH molecule are being investigated using Gas Chromatography Mass Spectrometry (GC-MS) analysis, Ultraviolet-Visible (UV-Vis), Fourier Transform Infrared Spectroscopy (FT-IR), and Density Functional Theory (DFT) approach with the Becke,3-parameter, Lee-Yang-Parr (B3LYP) method, 6-311++G (d, p) basis set is used to analyse the geometrical parameters, Highest Occupied Molecular Orbital and the Lowest Unoccupied Molecular Orbital (HOMO-LUMO), and Molecular Electrostatic Potential (MEP) mapping. In the 3TMH molecules, the computed Natural Bond Orbital (NBO) analysis exhibit the high stabilization interaction (intra-inter, hydrogen bonding, and charge delocalization) between the donor and acceptor. The UV-Vis spectra of the maximum absorption correlated with different solvents as determined by Time-Dependent Density Functional Theory (TD-DFT). According to Veda 04, the measured FT-IR spectrum and the theoretical spectra of vibrational assignment with Potential energy distribution (PED%) are in good agreement. The Electron Localization Function (ELF) and Localized Orbital Locator (LOL) mapping has provided an explanation for the chemical bonding within fragments, as well as interactions between the atoms. The strong attraction, strong repulsion, and weak interaction have been estimated Reduced Density Gradient (RDG). Furthermore, the molecular docking examined ligand-protein interaction of least binding energy 6.73 kcal/mol against anti-cancer activity.
引用
收藏
页数:15
相关论文
共 85 条
  • [41] FT-IR, FT-Raman, NMR and UV-vis spectra, vibrational assignments and DFT calculations of 4-butyl benzoic acid
    Karabacak, M.
    Cinar, Z.
    Kurt, M.
    Sudha, S.
    Sundaraganesan, N.
    [J]. SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2012, 85 (01) : 179 - 189
  • [42] Hydrogen bonds interactions in biuret-water clusters: FTIR, X-ray diffraction, AIM, DFT, RDG, ELF, NLO analysis
    Kazachenko, Aleksandr S.
    Issaoui, Noureddine
    Sagaama, Abir
    Malyar, Yuriy N.
    Al-Dossary, Omar
    Bousiakou, Leda G.
    Kazachenko, Anna S.
    Miroshnokova, Angelina V.
    Xiang, Zhouyang
    [J]. JOURNAL OF KING SAUD UNIVERSITY SCIENCE, 2022, 34 (08)
  • [43] Solvent effect on the self-association of the 1,2,4-triazole: A DFT study
    Khodiev, Masrur
    Holikulov, Utkirjon
    Jumabaev, Abduvakhid
    Issaoui, Noureddine
    Lvovich, Lavrik Nikolay
    Al-Dossary, Omar M.
    Bousiakoug, Leda G.
    [J]. JOURNAL OF MOLECULAR LIQUIDS, 2023, 382
  • [44] FT-IR, molecular structure, first order hyperpolarizability, HOMO and LUMO analysis, MEP and NBO analysis of 2-(4-chloropheny1)-2-oxoethyl 3-nitrobenzoate
    Kumar, C. S. Chidan
    Panicker, C. Yohannan
    Fun, Hoong-Kun
    Mary, Y. Sheena
    Harikumar, B.
    Chandraju, S.
    Quah, Ching Kheng
    Ooi, Chin Wei
    [J]. SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2014, 126 : 208 - 219
  • [45] Investigations on Growth, Characterization, NCI-RDG, AIM, Molecular Docking and In-Silico ADME Properties of 1,2-Benzene Dicarboxylic Acid Anhydride
    Kumar, G. Saravana
    Jeyalaxmi, M.
    Boukabcha, N.
    Vijayanarasimhan, K.
    Chouaih, A.
    [J]. ORBITAL-THE ELECTRONIC JOURNAL OF CHEMISTRY, 2024, 16 (01): : 1 - 9
  • [46] Spectroscopic (FT-IR and FT-Raman) investigation, first order hyperpolarizability, NBO, HOMO-LUMO and MEP analysis of 6-nitrochromone by ab initio and density functional theory calculations
    Kumar, J. Senthil
    Jeyavijayan, S.
    Arivazhagan, M.
    [J]. SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2015, 136 : 771 - 781
  • [47] DFT study on the polymerization mechanism of aleuritic acid and jalaric acid in shellac molecule
    Kumar, Saurav
    Sharma, Anupma
    Cherwoo, Lubhan
    Thombare, Nandkishore
    Bhondekar, Amol P.
    [J]. KUWAIT JOURNAL OF SCIENCE, 2024, 51 (01)
  • [48] Molecular docking, drug-likeness and DFT study of some modified tetrahydrocurcumins as potential anticancer agents
    Mahal, Ahmed
    Al-Janabi, Marwan
    Eyupoglu, Volkan
    Alkhouri, Anas
    Chtita, Samir
    Kadhim, Mustafa M.
    Obaidullah, Ahmad J.
    Alotaibi, Jawaher M.
    Wei, Xiaoyi
    Pratama, Mohammad Rizki Fadhil
    [J]. SAUDI PHARMACEUTICAL JOURNAL, 2024, 32 (01)
  • [49] Computational investigation, effects of polar and non-polar solvents on optimized structure with topological parameters (ELF, LOL, AIM, and RDG) of three glycine derivative compounds
    Manickavelu, Thirunavukkarasu
    Govindrajan, Balaji
    Sambantham, Muthu
    Panneerselvam, Prabakaran
    Irfan, Ahmad
    [J]. STRUCTURAL CHEMISTRY, 2022, 33 (04) : 1295 - 1319
  • [50] Molecular structure, FT-IR, vibrational assignments, HOMO-LUMO, MEP, NBO analysis and molecular docking study of ethyl-6-(4-chlorophenyl)-4-(4-fluorophenyl)-2-oxocyclohex-3-ene-1-carboxylate
    Mary, Y. Sheena
    Panicker, C. Yohannan
    Sapnakumari, M.
    Narayana, B.
    Sarojini, B. K.
    Al-Saadi, Abdulaziz A.
    Van Alsenoy, Christian
    War, Javeed Ahmad
    [J]. SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2015, 138 : 73 - 84