Interspecific allometric scaling in eDNA production among northwestern Atlantic bony fishes reflects physiological allometric scaling

被引:7
作者
Yates, Matthew C. [1 ]
Wilcox, Taylor M. [2 ]
Stoeckle, M. Y. [3 ]
Heath, Daniel D. [1 ]
机构
[1] Univ Windsor, Windsor, ON, Canada
[2] Natl Genom Ctr Wildlife & Fish Conservat, Rocky Mt Res Stn, Missoula, MT USA
[3] Rockefeller Univ, New York, NY USA
来源
ENVIRONMENTAL DNA | 2023年 / 5卷 / 05期
基金
加拿大自然科学与工程研究理事会;
关键词
abundance; allometric scaling; allometry; biomass; eDNA; fishes; METABOLIC THEORY; RATES; COMMUNITIES;
D O I
10.1002/edn3.381
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
Relating environmental DNA (eDNA) signal strength to organism abundance requires a fundamental understanding of eDNA production. A number of studies have demonstrated that eDNA production may scale allometrically-that is, larger organisms tend to exhibit lower mass-specific eDNA production rates, likely due to allometric scaling in key processes related to eDNA production (e.g., surface area, excretion/egestion). While most previous studies have examined intraspecific allometry, physiological rates and organism surface area also scale allometrically across species. We therefore hypothesize that eDNA production will similarly exhibit interspecific allometric scaling. To evaluate this hypothesis, we reanalyzed previously published eDNA data from Stoeckle et al. (ICES Journal of Marine Science, 78(1), 293-304, 2021) which compared metabarcoding read count to organism count and biomass data obtained from trawl surveys off the New Jersey coast. Using a Bayesian model, we empirically estimated the value of the allometric scaling coefficient ("b") for Northwestern Atlantic bony fishes to be 0.77 (credible interval = 0.64-0.92), although our model failed to converge for Chondrichthyan species. We found that integrating allometry significantly improved correlations between organism abundance and metabarcoding read count relative to traditional metrics of abundance (density and biomass) for bony fishes. Although substantial unexplained variation remains in the relationship between read count and organism abundance, our study provides evidence that eDNA production may scale allometrically across species in some contexts. Future studies investigating the relationship between eDNA signal strength and metrics of fish abundance could potentially be improved by accounting for allometry; to this end, we developed an online tool that can facilitate the integration of allometry in eDNA/abundance relationships.
引用
收藏
页码:1105 / 1115
页数:11
相关论文
共 49 条
  • [41] Towards next-generation biodiversity assessment using DNA metabarcoding
    Taberlet, Pierre
    Coissac, Eric
    Pompanon, Francois
    Brochmann, Christian
    Willerslev, Eske
    [J]. MOLECULAR ECOLOGY, 2012, 21 (08) : 2045 - 2050
  • [42] Release of eDNA by different life history stages and during spawning activities of laboratory-reared Japanese eels for interpretation of oceanic survey data
    Takeuchi, Aya
    Iijima, Takuya
    Kakuzen, Wataru
    Watanabe, Shun
    Yamada, Yoshiaki
    Okamura, Akihiro
    Horie, Noriyuki
    Mikawa, Naomi
    Miller, Michael J.
    Kojima, Takahito
    Tsukamoto, Katsumi
    [J]. SCIENTIFIC REPORTS, 2019, 9 (1)
  • [43] Predicting nutrient excretion of aquatic animals with metabolic ecology and ecological stoichiometry: a global synthesis
    Vanni, Michael J.
    McIntyre, Peter B.
    [J]. ECOLOGY, 2016, 97 (12) : 3460 - 3471
  • [44] WETHERBEE BM, 1993, COPEIA, P416
  • [45] Predicting the slope of the allometric scaling of consumption rates in fish using the physiology of growth
    Wiff, Rodrigo
    Roa-Ureta, Ruben
    [J]. MARINE AND FRESHWATER RESEARCH, 2008, 59 (10) : 912 - 921
  • [46] The relationship between eDNA particle concentration and organism abundance in nature is strengthened by allometric scaling
    Yates, M. C.
    Glaser, D. M.
    Post, J. R.
    Cristescu, M. E.
    Fraser, D. J.
    Derry, A. M.
    [J]. MOLECULAR ECOLOGY, 2021, 30 (13) : 3068 - 3082
  • [47] Yates M.C., 2019, Environm. DNA, V1, P5, DOI [DOI 10.1002/EDN3.7, 10.1002/edn3.7]
  • [48] Integrating physiology and environmental dynamics to operationalize environmental DNA (eDNA) as a means to monitor freshwater macro-organism abundance
    Yates, Matthew C.
    Cristescu, Melania E.
    Derry, Alison M.
    [J]. MOLECULAR ECOLOGY, 2021, 30 (24) : 6531 - 6550
  • [49] Young M. K., 2021, Environmental DNA, V3, P553, DOI DOI 10.1002/EDN3.150