Comparative genome-wide association study on body weight in Chinese native ducks using four models

被引:0
|
作者
Zhang, Yuchen [1 ]
Jia, Chao [1 ]
Li, Shiwei [2 ]
Wang, Sike [2 ]
He, Zongliang [3 ]
Wu, Guansuo [3 ]
Yu, Minli [1 ]
Lu, Yinglin [1 ]
Yu, Debing [1 ]
机构
[1] Nanjing Agr Univ, Coll Anim Sci & Technol, Dept Anim Genet Breeding & Reprod, Nanjing 210095, Jiangsu, Peoples R China
[2] Xizang Agr & Anim Husb Univ, Coll Anim Sci, Linzhi 860000, Peoples R China
[3] Nanjing Acad Anim Husb & Poultry, Nanjing 210000, Jiangsu, Peoples R China
关键词
genome-wide association study; body weight; Jinling White ducks; candidate gene; SNPs; GROWTH-HORMONE GH; SKELETAL-MUSCLE; EXPRESSION; GENES; DIFFERENTIATION; POPULATIONS; GENERATION; MYOD;
D O I
10.1016/j.psj.2024.103899
中图分类号
S8 [畜牧、 动物医学、狩猎、蚕、蜂];
学科分类号
0905 ;
摘要
Saju Pillai [ab] statistical models. Comparative studies indicated that factored spectrally transformed linear mixed models (FaST-LMM) demonstrated the most superior efficiency, yielding more results with the minimal false positives. We discovered that PUS7, FBXO11, FOXN2, MSH6, and SLC4A4 were associated with BWB. RAG2, and TMEFF2 were candidate genes for BW1, and STARD13, Klotho, ZAR1L are likely candidates for BW3 and BW5. PLXNC1, ATP1A1, CD58, FRYL, OCIAD1, and OCIAD2 were linked to BW7. These findings provide a genetic reference for the selection and breeding of Jinling White ducks, while also deepened our understanding of Growth and development phenotypic in ducks.
引用
收藏
页数:12
相关论文
共 50 条
  • [41] Genome-wide association study reveals the genetic determinism of serum biochemical indicators in ducks
    Tang, Hehe
    Zhang, He
    Liu, Dapeng
    Wang, Zhen
    Yu, Daxin
    Fan, Wenlei
    Guo, Zhanbao
    Huang, Wei
    Hou, Shuisheng
    Zhou, Zhengkui
    BMC GENOMICS, 2022, 23 (01)
  • [42] Identification of major genomic regions for soybean seed weight by genome-wide association study
    Cao, Yongce
    Jia, Shihao
    Chen, Liuxing
    Zeng, Shunan
    Zhao, Tuanjie
    Karikari, Benjamin
    MOLECULAR BREEDING, 2022, 42 (07)
  • [43] Genome-wide pathway analysis of a genome-wide association study on psoriasis and Behcet's disease
    Lee, Young Ho
    Choi, Sung Jae
    Ji, Jong Dae
    Song, Gwan Gyu
    MOLECULAR BIOLOGY REPORTS, 2012, 39 (05) : 5953 - 5959
  • [44] Genome-wide association analysis of neck ring traits in NongHua ma male ducks
    Wang, H.
    Yang, C.
    Wang, J.
    Xi, Y.
    Qi, J.
    Hu, J.
    Bai, L.
    Li, L.
    Mustafa, A.
    Liu, H.
    BRITISH POULTRY SCIENCE, 2023, 64 (06) : 670 - 677
  • [45] Genome-wide association study for boll weight in Gossypium hirsutum races
    Yuanyuan Wang
    Xinlei Guo
    Yanchao Xu
    Runrun Sun
    Xiaoyan Cai
    Zhongli Zhou
    Tengfei Qin
    Ye Tao
    Baihui Li
    Yuqing Hou
    Qinglian Wang
    Fang Liu
    Functional & Integrative Genomics, 2023, 23
  • [46] Replication of a Genome-Wide Association Study of Birth Weight in Preterm Neonates
    Ryckman, Kelli K.
    Feenstra, Bjarke
    Shaffer, John R.
    Bream, Elise N. A.
    Geller, Frank
    Feingold, Eleanor
    Weeks, Daniel E.
    Gadow, Enrique
    Cosentino, Viviana
    Saleme, Cesar
    Simhan, Hyagriv N.
    Merrill, David
    Fong, Chin-To
    Busch, Tamara
    Berends, Susan K.
    Comas, Belen
    Camelo, Jorge L.
    Boyd, Heather
    Laurie, Cathy C.
    Crosslin, David
    Zhang, Qi
    Doheny, Kimberly F.
    Pugh, Elizabeth
    Melbye, Mads
    Marazita, Mary L.
    Dagle, John M.
    Murray, Jeffrey C.
    JOURNAL OF PEDIATRICS, 2012, 160 (01) : 19 - U56
  • [47] Genome-wide association study for feed efficiency traits using SNP and haplotype models
    Schweer, Kashly R.
    Kachman, Stephen D.
    Kuehn, Larry A.
    Freetly, Harvey C.
    Pollak, John E.
    Spangler, Matthew L.
    JOURNAL OF ANIMAL SCIENCE, 2018, 96 (06) : 2086 - 2098
  • [48] A genome-wide association study identifies genomic loci associated with backfat thickness, carcass weight, and body weight in two commercial pig populations
    Yuanmei Guo
    Hengqing Qiu
    Shijun Xiao
    Zhenfang Wu
    Ming Yang
    Jie Yang
    Jun Ren
    Lusheng Huang
    Journal of Applied Genetics, 2017, 58 : 499 - 508
  • [49] A genome-wide association study identifies genomic loci associated with backfat thickness, carcass weight, and body weight in two commercial pig populations
    Guo, Yuanmei
    Qiu, Hengqing
    Xiao, Shijun
    Wu, Zhenfang
    Yang, Ming
    Yang, Jie
    Ren, Jun
    Huang, Lusheng
    JOURNAL OF APPLIED GENETICS, 2017, 58 (04) : 499 - 508
  • [50] Genome-wide association study for birth, weaning and yearling weight in Colombian Brahman cattle
    Martinez, Rodrigo
    Bejarano, Diego
    Gomez, Yolanda
    Dasoneville, Romain
    Jimenez, Ariel
    Even, Gael
    Soelkner, Johann
    Meszaros, Gabor
    GENETICS AND MOLECULAR BIOLOGY, 2017, 40 (02) : 453 - 459