The complete chloroplast genome sequence of Viola labradorica (Violaceae)

被引:0
|
作者
Go, Ah-Reum [1 ]
Yoo, Ki-Oug [1 ]
机构
[1] Kangwon Natl Univ, Dept Biol Sci, Chunchon 24341, South Korea
来源
KOREAN JOURNAL OF PLANT TAXONOMY | 2024年 / 54卷 / 02期
基金
新加坡国家研究基金会;
关键词
Chloroplast genome; phylogenetic analysis; plastome; Viola labradorica; Violaceae;
D O I
10.11110/kjpt.2024.54.2.121
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Viola labradorica is commonly known as Alpine violet, American dog violet, Dog violet, and Labrador violet. This species is distributed throughout eastern Canada and North America. In the present study, we sequenced the chloroplast genome of V. labradorica for the first time and performed a phylogenetic analysis of the genus Viola. The length of the chloroplast genome of V. labradorica was 158,751 bp. A large single-copy region (87,211 bp), a small single-copy region (17,344 bp), and two inverted repeat regions (27,098 bp each) were identified. A phylogenetic analysis was conducted using 77 protein-coding genes from the chloroplast genomes of 34 Viola. . Salix koriyanagi (Salicaceae) was used as an outgroup. The genus Viola forms a monophyletic clade. Among the clades for the genus Viola, , the sect. Viola formed a clade and was divided into two subclades: subsect. Viola and subsect. Rostratae. . Within the subsect. Rostratae, V. labradorica was placed in a basal position. These results contribute to a clear identification of the phylogenetic position of V. labradorica in the subsect. Rostratae.
引用
收藏
页码:121 / 125
页数:5
相关论文
共 50 条
  • [31] The complete chloroplast genome sequence of Heracleum yungningense
    Zheng, Zhen-Ying
    Li, Jun
    Xie, Deng-Feng
    Zhou, Song-Dong
    He, Xing-Jin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02): : 1783 - 1784
  • [32] The complete chloroplast genome sequence ofRosa minutifolia
    Zhao, Xia
    Gao, Chengwen
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 3338 - 3339
  • [33] The complete chloroplast genome sequence of Ostrya chisosensis
    Li, Ying
    Yan, Biyao
    Wang, Gaini
    Lu, Zhiqiang
    Yang, Yongzhi
    CONSERVATION GENETICS RESOURCES, 2019, 11 (01) : 93 - 95
  • [34] The complete chloroplast genome sequence of Schefflera octophylla
    Zong, Xuefeng
    Song, Jixuan
    Lv, Jun
    Wang, Sangen
    MITOCHONDRIAL DNA PART A, 2016, 27 (06) : 4685 - 4686
  • [35] The complete chloroplast genome sequence of Begonia pedatifida
    Li, Huan
    Zhang, Tianlei
    Liang, Jiale
    Tang, Xuan
    Chenyang, Zhuoyu
    Zhu, Rong
    Chen, Ying
    Kuang, Qishan
    Huang, Rongjie
    Yin, Hanbin
    Zeng, Xingyu
    Liu, Yongle
    Du, Zhitian
    Huang, Kerui
    Sun, Lei
    MITOCHONDRIAL DNA PART B-RESOURCES, 2024, 9 (10): : 1302 - 1306
  • [36] The complete chloroplast genome sequence of Vitis piasezkii
    Fu, Peining
    Tian, Quanyou
    Li, Rongfang
    Wu, Wei
    Song, Shiren
    Lu, Jiang
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 1034 - 1035
  • [37] The complete chloroplast genome sequence ofVitis berlandieri
    Xiang, Jiang
    Cheng, Jianhui
    Wei, Lingzhu
    Cui, Pengfei
    Li, Mingshan
    Wu, Jiang
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 3068 - 3069
  • [38] The complete chloroplast genome sequence of Actinidia eriantha
    Tang, Ping
    Shen, Ruinan
    He, Ruiwen
    Yao, Xiaohong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2114 - 2115
  • [39] The complete chloroplast genome sequence of Trollius macropetalus
    Liu, Dejiang
    Shen, Jian
    Fan, Wenjing
    Yang, Chengjun
    Xia, Jun
    Li, Lili
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (12): : 3501 - 3502
  • [40] The complete chloroplast genome sequence ofHemerocallis fulva
    Zheng, Yan
    Li, Jingling
    Chen, Haimei
    Huang, Linfang
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 3561 - 3562