Conformational Dynamics of an Amyloidogenic Intermediate of Transthyretin: Implications for Structural Remodeling and Amyloid Formation

被引:1
|
作者
Leach, Benjamin I. [1 ]
Ferguson, James A. [1 ]
Morgan, Gareth [2 ,3 ]
Sun, Xun [1 ]
Kroon, Gerard [1 ]
Oyen, David [1 ]
Dyson, H. Jane [1 ]
Wright, Peter E. [1 ,4 ]
机构
[1] Scripps Res Inst, Dept Integrat Struct & Computat Biol, 10550 North Torrey Pines Rd, La Jolla, CA 92037 USA
[2] Scripps Res Inst, Dept Chem, 10550 North Torrey Pines Rd, La Jolla, CA 92037 USA
[3] Scripps Res Inst, Dept Mol & Expt Med, 10550 North Torrey Pines Rd, La Jolla, CA 92037 USA
[4] Scripps Res Inst, Skaggs Inst Chem Biol, 10550 North Torrey Pines Rd, La Jolla, CA 92037 USA
基金
美国国家卫生研究院;
关键词
protein aggregation; transthyretin amyloidosis; protein misfolding; NMR relaxation dispersion; protein dynamics; RELAXATION DISPERSION EXPERIMENTS; EXCITED PROTEIN STATES; CHEMICAL-SHIFTS; PRE-ALBUMIN; NMR-SPECTROSCOPY; FIBRIL FORMATION; AGGREGATION; TEMPERATURE; STABILITY; VARIANTS;
D O I
10.1016/j.jmb.2024.168673
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The aggregation pathway of transthyretin (TTR) proceeds through rate -limiting dissociation of the tetramer (a dimer of dimers) and partial misfolding of the resulting monomer, which assembles into amyloid structures through a downhill polymerization mechanism. The structural features of the aggregationprone monomeric intermediate are poorly understood. NMR relaxation dispersion offers a unique opportunity to characterize amyloidogenic intermediates when they exchange on favorable timescales with NMR-visible ground states. Here we use NMR to characterize the structure and conformational dynamics of the monomeric F87E mutant of human TTR. Chemical shifts derived from analysis of multinuclear relaxation dispersion data provide insights into the structure of a low-lying excited state that exchanges with the ground state of the F87E monomer at a rate of 3800 s - 1 . Disruption of the subunit interfaces of the TTR tetramer leads to destabilization of edge strands in both (3 -sheets of the F87E monomer. Conformational fluctuations are propagated through the entire hydrogen bonding network of the DAGH (3sheet, from the inner (3 -strand H, which forms the strong dimer-dimer interface in the TTR tetramer, to outer strand D which is unfolded in TTR fibrils. Fluctuations are also propagated from the AB loop in the weak dimer-dimer interface to the EF helix, which undergoes structural remodeling in fibrils. The conformational fluctuations in both regions are enhanced at acidic pH where amyloid formation is most favorable. The relaxation dispersion data provide insights into the conformational dynamics of the amyloidogenic state of monomeric TTR that predispose it for structural remodeling and progression to amyloid fibrils. (c) 2024 Elsevier Ltd. All rights are reserved, including those for text and data mining, AI training, and similar technologies.
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页数:17
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