Whole-exome sequencing in a cohort of Chinese patients with isolated cervical dystonia

被引:1
作者
Wu, Rui [1 ,2 ]
Chen, Wen -Tian [3 ]
Dou, Wei-Kang [1 ]
Zhou, Hui-Min [1 ]
Shi, Ming [1 ]
机构
[1] Fourth Mil Med Univ, Xijing Hosp, Dept Neurol, 15 Changle West Rd, Xian 710032, Shaanxi, Peoples R China
[2] Fourth Xian Hosp, Xian Peoples Hosp, Dept Neurol, Xian 710004, Peoples R China
[3] Northwest Univ, Coll Life Sci, Lab Funct Glyc, Xian 710069, Peoples R China
关键词
Cervical dystonia; Dystonia phenotype-associated genes; Deleterious variants; Whole-exome sequencing; ACMG; DCTN1; CONSENSUS; GENES; VARIANTS;
D O I
10.1016/j.heliyon.2024.e31885
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background: Dystonia is a kind of movement disorder but its pathophysiological mechanisms are still largely unknown. Recent evidence reveals that genetical defects may play important roles in the pathogenesis of dystonia. Objectives and Methods: -To explore possible causative genes in Chinese dystonia patients, DNA samples from 42 sporadic patients with isolated cervical dystonia were subjected to whole-exome sequencing. Rare deleterious variants associated with dystonia phenotype were screened out and then classified according to the American College of Medical Genetics and Genomics (ACMG) criteria. Phenolyzer was used for analyzing the most probable candidates correlated with dystonia phenotype, and SWISS -MODEL server was for predicting the 3D structures of variant proteins. Results: Among 42 patients (17 male and 25 female) recruited, a total of 36 potentially deleterious variants of dystonia-associated genes were found in 30 patients (30/42, 71.4 %). Four disease-causing variants including a pathogenic variant in PLA2G6 (c.797G > C) and three likely pathogenic variants in DCTN1 (c.73C > T), SPR (c.1A > C) and TH (c.56C > G) were found in four patients separately. Other 32 variants were classified as uncertain significance in 26 patients. Phenolyzer prioritized genes TH , PLA2G6 and DCTN1 as the most probable candidates correlated with dystonia phenotype. Although 3D prediction of DCTN1 and PLA2G6 variant proteins detected no obvious structural alterations, the mutation in DCTN1 (c.73C > T:p.Arg25Trp) was closely adjacent to its key functional domain. Conclusion: Our whole-exome sequencing results identified a novel variant in DCTN1 in sporadic Chinese patients with isolated cervical dystonia, which however, needs our further study on its exact role in dystonia pathogenesis.
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页数:11
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