N-Benzoyl-morpholine-4-carbothioamides: Crystal structures, Hirshfeld surface analysis, and Density functional theory calculations

被引:2
作者
Aziz, Hamid [1 ,2 ]
Saeed, Aamer [1 ]
Simpson, Jim [3 ]
Hokelek, Tuncer [4 ]
Jabeen, Erum [5 ]
Khan, Sher Wali [2 ]
机构
[1] Quaid I Azam Univ, Dept Chem, Islamabad 45320, Pakistan
[2] Rawalpindi Women Univ, Dept Chem, Rawalpindi, Pakistan
[3] Univ Otago, Dept Chem, Dunedin 9056, New Zealand
[4] Hacettepe Univ Beytepe, Dept Phys, TR-06800 Ankara, Turkiye
[5] Allama Iqbal Open Univ, Dept Chem, H-8, Islamabad 44000, Pakistan
关键词
Asymmetric unit; Electrostatic potential; Fingerprint plot; Hydrogen bond; N -Benzoyl carbothioamide; van der Waals interactions; INTERMOLECULAR INTERACTIONS; THIOUREA DERIVATIVES; QUANTITATIVE-ANALYSIS; MODEL ENERGIES; COORDINATION; LIGANDS;
D O I
10.1016/j.molstruc.2024.137954
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The current research work describes facile synthesis, single crystal X-ray structures, Hirshfeld surface (HS) analysis, and density functional theory (DFT) calculations of two N-benzoyl-morpholine-4-carbothioamides (NDMC and NMMC). Consequently, the synthesized compounds, C12H12Cl2N2O2S (NDMC) and C13H16N2O2S (NMMC) crystallized in triclinic and monoclinic crystal systems each having respective space groups of P -1 and P 21, with corresponding a = 7.8045 (3) & Aring;, b = 12.8458 (6) & Aring;, c = 13.4946 (7) & Aring;, alpha = 97.313 (4)degrees, beta = 94.358 (4)degrees, gamma = 93.348 (3)degrees, Z = 4 and V =1334.84 (11) & Aring;3 for compound (NDMC). Similarly, for compound (NMMC), a = 7.3322 (2) & Aring;, b = 5.3045 (1) & Aring;, c = 16.3367 (5) & Aring;, alpha = 90 degrees, beta = 94.285 (3)degrees, gamma = 90 degrees, Z = 2 and V = 633.62 (3) & Aring;3. Subsequently, the asymmetric unit of compound (NDMC) contains two molecules, while compound (NMMC) has single molecule. Strong intermolecular N-H & ctdot;O, and weaker C-H & ctdot;Cl and C-H & ctdot;S hydrogen bonds link the molecules of (NDMC) into dimers, enclosing R22(7) and R22(9) ring motifs. Intermolecular C-H & ctdot;S, bifurcated N-H & ctdot;O and C-H & ctdot;O hydrogen bonds, as well as C-H & ctdot;pi interactions in (NMMC), attach molecules, enclosing R22(7) and R22(14) ring motifs. Furthermore, HS analysis explored, visualized, and quantified the significance of hydrogen bond contacts, and revealed active contributions for the packed crystals encompasses H...H 33.6 % for (NDMC), and 46.6 % for (NMMC), H...S/S...H 17.9 % for (NDMC), and 17.0 % for (NMMC), H...C/C...H 9.0 % for (NDMC), and 19.7 % for (NMMC), H...O/O...H 14.8 % for (NDMC), and 14.3 % for (NMMC), and H...Cl/Cl...H 17.8 % for (NMMC). Hydrogen bonding and van der Waals contacts strongly influence crystal packings of the crystallized compounds. Similarly, evaluation of energy frameworks (electrostatic, dispersion and total energies) indicated stabilization is strongly dominated by dispersion energy contribution in compound (NMMC). Finally, optimum molecular structures of both the compounds (NDMC and NMMC), were related with the experimental ones employing DFT at B3LYP/6-311G**(d,p) level. The most stable optimized conformation was geometrically complementary with the crystal structure. DFT computed frontier molecular energies and isodensities predicted these compounds to exhibit better electron pair acceptance nature than electron pair donor.
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页数:15
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