Genomics and Ecology of Novel N2O-Reducing Microorganisms

被引:426
作者
Hallin, Sara [1 ]
Philippot, Laurent [2 ]
Loffler, Frank E. [3 ,4 ,5 ]
Sanford, Robert A. [6 ]
Jones, Christopher M. [1 ]
机构
[1] Swedish Univ Agr Sci, Dept Forest Mycol & Plant Pathol, S-75007 Uppsala, Sweden
[2] Univ Bourgogne Franche Comte, Agroecol, AgroSup Dijon, INRA, F-21000 Dijon, France
[3] Univ Tennessee, Dept Microbiol, Ctr Environm Biotechnol, Dept Civil & Environm Engn,Dept Biosyst Engn & So, Knoxville, TN 37996 USA
[4] Oak Ridge Natl Lab, Biosci Div, Oak Ridge, TN 37831 USA
[5] Oak Ridge Natl Lab, Joint Inst Biol Sci, Oak Ridge, TN 37831 USA
[6] Univ Illinois, Dept Geol, Champaign, IL 61820 USA
基金
瑞典研究理事会;
关键词
NITROUS-OXIDE PRODUCTION; N2O EMISSIONS; NITRIC-OXIDE; DENITRIFIER COMMUNITIES; WOLINELLA-SUCCINOGENES; FE(III) REDUCTION; MOLECULAR-BASIS; SOIL; DIVERSITY; BACTERIA;
D O I
10.1016/j.tim.2017.07.003
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Microorganisms with the capacity to reduce the greenhouse gas nitrous oxide (N2O) to harmless dinitrogen gas are receiving increased attention due to increasing N2O emissions (and our need to mitigate climate change) and to recent discoveries of novel N2O-reducing bacteria and archaea. The diversity of denitrifying and nondenitrifying microorganisms with capacity for N2O reduction was recently shown to be greater than previously expected. A formerly overlooked group (clade II) in the environment include a large fraction of nondenitrifying N2O reducers, which could be N2O sinks without major contribution to N2O formation. We review the recent advances about fundamental understanding of the genomics, physiology, and ecology of N2O reducers and the importance of these findings for curbing N2O emissions.
引用
收藏
页码:43 / 55
页数:13
相关论文
共 99 条
  • [31] Soil biochar amendment shapes the composition of N2O-reducing microbial communities
    Harter, Johannes
    Weigold, Pascal
    El-Hadidi, Mohamed
    Huson, Daniel H.
    Kappler, Andreas
    Behrens, Sebastian
    [J]. SCIENCE OF THE TOTAL ENVIRONMENT, 2016, 562 : 379 - 390
  • [32] Characterization of Fe(III) reduction by chlororespiring Anaeromxyobacter dehalogenans
    He, Q
    Sanford, RA
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2003, 69 (05) : 2712 - 2718
  • [33] A review of chemical reactions of nitrification intermediates and their role in nitrogen cycling and nitrogen trace gas formation in soil
    Heil, J.
    Vereecken, H.
    Brueggemann, N.
    [J]. EUROPEAN JOURNAL OF SOIL SCIENCE, 2016, 67 (01) : 23 - 39
  • [34] Nitrogen removal and spatial distribution of denitrifier and anammox communities in a bioreactor for mine drainage treatment
    Herbert, Roger B., Jr.
    Winbjork, Harry
    Hellman, Maria
    Hallin, Sara
    [J]. WATER RESEARCH, 2014, 66 : 350 - 360
  • [35] Detection and Diversity of Fungal Nitric Oxide Reductase Genes (p450nor) in Agricultural Soils
    Higgins, Steven A.
    Welsh, Allana
    Orellana, Luis H.
    Konstantinidis, Konstantinos T.
    Chee-Sanford, Joanne C.
    Sanford, Robert A.
    Schadt, Christopher W.
    Loffler, Frank E.
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2016, 82 (10) : 2919 - 2928
  • [36] Physical Factors Correlate to Microbial Community Structure and Nitrogen Cycling Gene Abundance in a Nitrate Fed Eutrophic Lagoon
    Highton, Matthew P.
    Roosa, Stephanie
    Crawshaw, Josie
    Schallenberg, Marc
    Morales, Sergio E.
    [J]. FRONTIERS IN MICROBIOLOGY, 2016, 7
  • [37] Hink L., 2016, ENV MICROBIOL
  • [38] Microbial regulation of terrestrial nitrous oxide formation: understanding the biological pathways for prediction of emission rates
    Hu, Hang-Wei
    Chen, Deli
    He, Ji-Zheng
    [J]. FEMS MICROBIOLOGY REVIEWS, 2015, 39 (05) : 729 - 749
  • [39] Phylogenetic analysis of nitrite, nitric oxide, and nitrous oxide respiratory enzymes reveal a complex evolutionary history for denitrification
    Jones, Christopher M.
    Stres, Blaz
    Rosenquist, Magnus
    Hallin, Sara
    [J]. MOLECULAR BIOLOGY AND EVOLUTION, 2008, 25 (09) : 1955 - 1966
  • [40] Jones CM, 2014, NAT CLIM CHANGE, V4, P801, DOI [10.1038/nclimate2301, 10.1038/NCLIMATE2301]