Structural insights into the regulation of protein- arginine kinase McsB by McsA

被引:1
作者
Arifuzzaman, Md [1 ]
Kwon, Eunju [2 ,3 ]
Kim, Dong Young [1 ]
机构
[1] Yeungnam Univ, Coll Pharm, Gyongsan 38541, South Korea
[2] Gyeongsang Natl Univ, Div Life Sci, Jinju 52828, South Korea
[3] Gyeongsang Natl Univ, Res Inst Mol Alchemy, Jinju 52828, South Korea
基金
新加坡国家研究基金会;
关键词
assembly of protein- arginine kinase; zinc- coordinating motif; crystal structure of the McsA/McsB complex; regulation of protein- arginine kinase activity; BACILLUS-SUBTILIS; NEGATIVE REGULATOR; GENE-EXPRESSION; TYROSINE KINASE; OPERON ENCODES; CLPC OPERON; 1ST GENE; STRESS; PHOSPHORYLATION; CTSR;
D O I
10.1073/pnas.2320312121
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
In gram - positive bacteria, phosphorylated arginine functions as a protein degradation signal in a similar manner as ubiquitin in eukaryotes. The protein - arginine phosphorylation is mediated by the McsAB complex, where McsB possesses kinase activity and McsA modulates McsB activity. Although mcsA and mcsB are regulated within the same operon, the role of McsA in kinase activity has not yet been clarified. In this study, we determined the molecular mechanism by which McsA regulates kinase activity. The crystal structure of the McsAB complex shows that McsA binds to the McsB kinase domain through a second zinc - coordination domain and the subsequent loop region. This binding activates McsB kinase activity by rearranging the catalytic site, preventing McsB self - assembly, and enhancing stoichiometric substrate binding. The first zinc - coordination and coiled - coil domains of McsA further activate McsB by reassembling the McsAB oligomer. These results demonstrate that McsA is the regulatory subunit for the reconstitution of the protein - arginine kinase holoenzyme. This study provides structural insight into how protein - arginine kinase directs the cellular protein degradation system.
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页数:10
相关论文
共 49 条
[31]   Structural Basis for the Mechanism and Substrate Specificity of Glycocyamine Kinase, a Phosphagen Kinase Family Member [J].
Lim, Kap ;
Pullalarevu, Sadhana ;
Surabian, Karen Talin ;
Howard, Andrew ;
Suzuki, Tomohiko ;
Moult, John ;
Herzberg, Osnat .
BIOCHEMISTRY, 2010, 49 (09) :2031-2041
[32]   Protein post-translational modifications in bacteria [J].
Macek, Boris ;
Forchhammer, Karl ;
Hardouin, Julie ;
Weber-Ban, Eilika ;
Grangeasse, Christophe ;
Mijakovic, Ivan .
NATURE REVIEWS MICROBIOLOGY, 2019, 17 (11) :651-664
[33]   Phaser crystallographic software [J].
McCoy, Airlie J. ;
Grosse-Kunstleve, Ralf W. ;
Adams, Paul D. ;
Winn, Martyn D. ;
Storoni, Laurent C. ;
Read, Randy J. .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2007, 40 :658-674
[34]   How do protein kinases recognize their substrates? [J].
Pinna, LA ;
Ruzzene, M .
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH, 1996, 1314 (03) :191-225
[35]  
Potel CM, 2018, NAT METHODS, V15, P187, DOI [10.1038/NMETH.4580, 10.1038/nmeth.4580]
[36]   PHOSPHAGEN KINASE EVOLUTION - EXPRESSION IN ECHINODERMS [J].
RATTO, A ;
SHAPIRO, BM ;
CHRISTEN, R .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1989, 186 (1-2) :195-203
[37]   Tricine-SDS-PAGE [J].
Schaegger, Hermann .
NATURE PROTOCOLS, 2006, 1 (01) :16-22
[38]   Quantitative Phosphoproteomics Reveals the Role of Protein Arginine Phosphorylation in the Bacterial Stress Response [J].
Schmidt, Andreas ;
Trentini, Debora Broch ;
Spiess, Silvia ;
Fuhrmann, Jakob ;
Ammerer, Gustav ;
Mechtler, Karl ;
Clausen, Tim .
MOLECULAR & CELLULAR PROTEOMICS, 2014, 13 (02) :537-550
[39]   NIH Image to ImageJ: 25 years of image analysis [J].
Schneider, Caroline A. ;
Rasband, Wayne S. ;
Eliceiri, Kevin W. .
NATURE METHODS, 2012, 9 (07) :671-675
[40]  
Schrodinger L. L. C., 2015, The PyMOL Molecular Graphics System