Whole genome sequence data of a lignocellulose-degrading bacterium, Arthrobacter koreensis BSB isolated from the soils of Santiniketan, India

被引:0
作者
Show, Binoy Kumar [1 ]
Ross, Andrew B. [2 ]
Biswas, Raju [3 ]
Chaudhury, Shibani [1 ]
Balachandran, Srinivasan [1 ]
机构
[1] Visva Bharati, Siksha Bhavana, Dept Environm Studies, Santini Ketan 731235, West Bengal, India
[2] Univ Leeds, Sch Chem & Proc Engn, Leeds LS2 9JT, England
[3] Visva Bharati, Siksha Bhavana, Dept Bot, Santini Ketan 731235, West Bengal, India
来源
DATA IN BRIEF | 2024年 / 57卷
基金
英国生物技术与生命科学研究理事会;
关键词
Cellulase; Enzyme; Lignocellulose; Arthrobacter koreensis BSB;
D O I
10.1016/j.dib.2024.110915
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
A draft genome sequence of an isolate of Arthrobacter koreensis BSB from Santiniketan soil is being published. A. koreensis BSB produces lignocellulases, which are crucial in plant biomass degradation. It is a potential source of enzymes of digestive importance, especially lignocellulases. Genomic DNA was isolated from a single bacterial colony using a QIAgen Blood and Tissue kit (QIAgen Inc., Canada). Illumina HiSeq X performed the DNA sequence, employing 2 x 150 paired-end chemistry, and 8,725,587 reads were obtained, corresponding to a sequence coverage of 755X. The draft genome assembly formed 15 contigs > 200 base pairs in length (N50 value = 446, 958 and L50 = 3). The genome size is 3,466,004 base pairs with an average GC percentage of 65.94 %. Annotation and prediction of genes were carried out with Prokka v.1.14.6, and 3,172 CDS, 3236 genes, 58 tRNA genes, 4 rRNA genes, and 2 tmRNA genes were identified. (c) 2024 Published by Elsevier Inc. This is an open access article under the CC BY license ( http://creativecommons.org/licenses/by/4.0/ )
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页数:8
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