Construction and validation of a prognostic model for bladder cancer based on disulfidptosis-related lncRNAs

被引:0
作者
Yang, Xiaoyu [1 ]
Zhang, Yunzhi [2 ]
Liu, Jun [1 ]
Feng, Yougang [1 ]
机构
[1] Suining Cent Hosp, Dept Urol, 127 Desheng West Rd, Suining 629000, Sichuan, Peoples R China
[2] Suining Cent Hosp, Dept Gastroenterol, Suining, Sichuan, Peoples R China
关键词
bladder cancer; disulfidptosis; long non-coding RNAs; risk prognostic model; TUMOR MICROENVIRONMENT; NONCODING RNA; IMMUNE; PATHWAY;
D O I
10.1097/MD.0000000000038750
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Background:Bladder cancer (BLCA) is a prevalent and aggressive cancer associated with high mortality and poor prognosis. Currently, studies on the role of disulfidptosis-related long non-coding RNAs (DRLs) in BLCA are limited. This study aims to construct a prognostic model based on DRLs to improve the accuracy of survival predictions for patients and identify novel targets for therapeutic intervention in BLCA management.Methods:Transcriptomic and clinical datasets for patients with BLCA were obtained from The Cancer Genome Atlas. Using multivariate Cox regression and least absolute shrinkage and selection operator techniques, a risk prognostic signature defined by DRLs was developed. The model's accuracy and prognostic relevance were assessed through Kaplan-Meier survival plots, receiver operating characteristic curves, concordance index, and principal component analysis. Functional and pathway enrichment analyses, including Gene Ontology, Kyoto Encyclopedia of Genes and Genomes, and Gene Set Enrichment Analysis, were conducted to elucidate the underlying biological processes. Immune cell infiltration was quantified using the CIBERSORT algorithm. Differences and functions of immune cells in different risk groups were evaluated through single-sample Gene Set Enrichment Analysis. The Tumor Immune Dysfunction and Exclusion predictor and tumor mutational burden (TMB) assessments were utilized to gauge the likelihood of response to immunotherapy. Drug sensitivity predictions were made using the Genomics of Drug Sensitivity in Cancer database.Results:A robust 8-DRL risk prognostic model, comprising LINC00513, SMARCA5-AS1, MIR4435-2HG, MIR4713HG, AL122035.1, AL359762.3, AC006160.1, and AL590428.1, was identified as an independent prognostic indicator. This model demonstrated strong predictive power for overall survival in patients with BLCA, revealing significant disparities between high- and low-risk groups regarding tumor microenvironment, immune infiltration, immune functions, TMB, Tumor Immune Dysfunction and Exclusion scores, and drug susceptibility.Conclusion:This study introduces an innovative prognostic signature of 8 DRLs, offering a valuable prognostic tool and potential therapeutic targets for bladder carcinoma. The findings have significant implications for TMB, the immune landscape, and patient responsiveness to immunotherapy and targeted treatments.
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页数:13
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  • [1] A novel cuproptosis-related lncRNA signature predicts prognosis and therapeutic response in bladder cancer
    Cai, Jinming
    Xie, Haoran
    Yan, Yilin
    Huang, Zhengnan
    Tang, Pengfei
    Cao, Xiangqian
    Wang, Zeyi
    Yang, Chenkai
    Wen, Jiling
    Tan, Mingyue
    Zhang, Fang
    Shen, Bing
    [J]. FRONTIERS IN GENETICS, 2023, 13
  • [2] Long non-coding RNA in bladder cancer
    Cao, Yuepeng
    Tian, Tian
    Li, Weijian
    Xue, Hanzi
    Zhan, Chuanfei
    Wu, Xuhong
    Wang, Chao
    Wu, Xiaoli
    Wu, Wanke
    Zheng, Shuyun
    Xie, Kaipeng
    [J]. CLINICA CHIMICA ACTA, 2020, 503 : 113 - 121
  • [3] The 2021 Updated European Association of Urology Guidelines on Metastatic Urothelial Carcinoma
    Cathomas, Richard
    Lorch, Anja
    Bruins, Harman M.
    Comperat, Eva M.
    Cowan, Nigel C.
    Efstathiou, Jason A.
    Fietkau, Rainer
    Gakis, Georgios
    Hernandez, Virginia
    Espinos, Estefania Linares
    Neuzillet, Yann
    Ribal, Maria J.
    Rouanne, Matthieu
    Thalmann, George N.
    van der Heijden, Antoine G.
    Veskimae, Erik
    Witjes, J. Alfred
    Milowsky, Matthew I.
    [J]. EUROPEAN UROLOGY, 2022, 81 (01) : 95 - 103
  • [4] Development of tumor mutation burden as an immunotherapy biomarker: utility for the oncology clinic
    Chan, T. A.
    Yarchoan, M.
    Jaffee, E.
    Swanton, C.
    Quezada, S. A.
    Stenzinger, A.
    Peters, S.
    [J]. ANNALS OF ONCOLOGY, 2019, 30 (01) : 44 - 56
  • [5] The PI3K Pathway at the Crossroads of Cancer and the Immune System: Strategies for Next Generation Immunotherapy Combinations
    Collins, Dearbhaile C.
    Chenard-Poirier, Maxime
    Lopez, Juanita S.
    [J]. CURRENT CANCER DRUG TARGETS, 2018, 18 (04) : 355 - 364
  • [6] Current best practice for bladder cancer: a narrative review of diagnostics and treatments
    Comperat, Eva
    Amin, Mahul B.
    Cathomas, Richard
    Choudhury, Ananya
    De Santis, Maria
    Kamat, Ashish
    Stenzl, Arnulf
    Thoeny, Harriet C.
    Witjes, Johannes Alfred
    [J]. LANCET, 2022, 400 (10364) : 1712 - 1721
  • [7] Mechanisms of immune evasion in bladder cancer
    Crispen, Paul L.
    Kusmartsev, Sergei
    [J]. CANCER IMMUNOLOGY IMMUNOTHERAPY, 2020, 69 (01) : 3 - 14
  • [8] The evolving tumor microenvironment From cancer initiation to metastatic outgrowth
    de Visser, Karin E.
    Joyce, Johanna A.
    [J]. CANCER CELL, 2023, 41 (03) : 374 - 403
  • [9] Autophagy and autophagy-related pathways in cancer
    Debnath, Jayanta
    Gammoh, Noor
    Ryan, Kevin M.
    [J]. NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2023, 24 (08) : 560 - 575
  • [10] Prognostic values of the immune microenvironment-related non-coding RNA IGF2BP2-AS1 in bladder cancer
    Ding, Ke
    Zheng, Zhihuan
    Han, Yu
    Huang, Xiangyun
    [J]. CELL CYCLE, 2022, 21 (23) : 2533 - 2549