16S rRNA Gene Sequencing of Gut Microbiota in Rheumatoid Arthritis Treated with 99Tc-MDP

被引:2
作者
Huang, Zhaowei [1 ,2 ]
Chen, Changming [3 ]
Tan, Linlin [4 ]
Ling, Yi [3 ]
Ma, Wukai [3 ]
Zhang, Jinan [1 ,2 ]
机构
[1] Shanghai Univ Tradit Chinese Med, Grad Sch, Shanghai, Peoples R China
[2] Shanghai Univ Med & Hlth Sci, Zhoupu Hosp, Dept Endocrinol & Rheumatol, Shanghai, Peoples R China
[3] Guizhou Univ Chinese Med, Affiliated Hosp 2, Dept Rheumatol & Immunol, Guiyang, Guizhou, Peoples R China
[4] Guangzhou Univ Chinese Med, Jinshazhou Hosp, Dept Internal Med, Guangzhou, Guangdong, Peoples R China
基金
中国国家自然科学基金;
关键词
rheumatoid arthritis; 99Tc-MDP; gut microbiota; 16S rRNA; bioinformatics; TC-99-METHYLENE DIPHOSPHONATE; TRYPTOPHAN-METABOLISM; METHOTREXATE; TRIAL;
D O I
10.2147/PGPM.S451065
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
Background: Rheumatoid arthritis (RA) is a common autoimmune disease with the main symptoms being joint swelling and pain. In severe cases, joint deformity or even complete loss of function occurs. Technetium methylene diphosphonate (99Tc-MDP) is widely used for RA treatment in China, but there are no studies on the effects of 99Tc-MDP on intestinal flora. Objective: To explore the effects of 99Tc-MDP treatment on the composition and function of the intestinal flora and to provide new information on the mechanism of 99Tc-MDP in RA treatment. Methods: Stool samples from RA patients before and after 99Tc-MDP treatment were collected to form two groups (Before and After). Total genomic DNA of the samples was extracted for 16S rRNA gene sequencing. The altered composition of the intestinal flora, the key target bacteria regulated by 99Tc-MDP, and the pathways of action of 99 Tc-MDP were analyzed by bioinformatics. Results: A total of 64 fresh stool samples were collected from 32 RA patients. Compared to the Before group, the After group showed increased Bacteroidetes abundance and decreased Firmicutes abundance. At the genus level, Prevotella increased whereas Escherichia decreased. Both alpha and beta diversity analyses showed that 99Tc-MDP treatment did not affect gut microbial diversity in RA patients. LEfSe analyses and random forest analyses showed Bacteroidetes, Prevotella, Enterococcus, Escherichia and Ruminococcaceae were the main 99Tc-MDP regulating bacteria. Functional enrichment analysis revealed that the functional differences in gut flora of the two groups centered on Metabolism and Genetic Information Processing. Conclusion: This study revealed differences in the composition of the gut microbiota in RA patients before and after 99Tc-MDP treatment. The therapeutic effect of 99Tc MDP is mainly achieved through Bacteroidetes, Prevotella, and Enterococcus. Regulating metabolism and genetic information processing of gut flora may be the mechanism of 99Tc-MDP in treating RA.
引用
收藏
页码:237 / 249
页数:13
相关论文
共 46 条
[1]   Gut Microbiota Regulation of Tryptophan Metabolism in Health and Disease [J].
Agus, Allison ;
Planchais, Julien ;
Sokol, Harry .
CELL HOST & MICROBE, 2018, 23 (06) :716-724
[2]  
Aletaha D, 2010, ANN RHEUM DIS, V69, P1580, DOI [10.1136/ard.2010.138461, 10.1002/art.27584]
[3]   The Pretreatment Gut Microbiome Is Associated With Lack of Response to Methotrexate in New-Onset Rheumatoid Arthritis [J].
Artacho, Alejandro ;
Isaac, Sandrine ;
Nayak, Renuka ;
Flor-Duro, Alejandra ;
Alexander, Margaret ;
Koo, Imhoi ;
Manasson, Julia ;
Smith, Philip B. ;
Rosenthal, Pamela ;
Homsi, Yamen ;
Gulko, Percio ;
Pons, Javier ;
Puchades-Carrasco, Leonor ;
Izmirly, Peter ;
Patterson, Andrew ;
Abramson, Steven B. ;
Pineda-Lucena, Antonio ;
Turnbaugh, Peter J. ;
Ubeda, Carles ;
Scher, Jose U. .
ARTHRITIS & RHEUMATOLOGY, 2021, 73 (06) :931-942
[4]   HLA Alleles Associated With Risk of Ankylosing Spondylitis and Rheumatoid Arthritis Influence the Gut Microbiome [J].
Asquith, Mark ;
Sternes, Peter R. ;
Costello, Mary-Ellen ;
Karstens, Lisa ;
Diamond, Sarah ;
Martin, Tammy M. ;
Li, Zhixiu ;
Marshall, Mhairi S. ;
Spector, Timothy D. ;
Kim-Anh Le Cao ;
Rosenbaum, James T. ;
Brown, Matthew A. .
ARTHRITIS & RHEUMATOLOGY, 2019, 71 (10) :1642-1650
[5]   Role of Intestinal Dysbiosis and Nutrition in Rheumatoid Arthritis [J].
Attur, Malavikalakshmi ;
Scher, Jose U. ;
Abramson, Steven B. ;
Attur, Mukundan .
CELLS, 2022, 11 (15)
[6]   PIM Kinases and Their Relevance to the PI3K/AKT/mTOR Pathway in the Regulation of Ovarian Cancer [J].
Aziz, Aziz Ur Rehman ;
Farid, Sumbal ;
Qin, Kairong ;
Wang, Hanqin ;
Liu, Bo .
BIOMOLECULES, 2018, 8 (01)
[7]  
Badsha Humeira, 2018, Open Rheumatol J, V12, P19, DOI 10.2174/1874312901812010019
[8]   Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 [J].
Bolyen, Evan ;
Rideout, Jai Ram ;
Dillon, Matthew R. ;
Bokulich, NicholasA. ;
Abnet, Christian C. ;
Al-Ghalith, Gabriel A. ;
Alexander, Harriet ;
Alm, Eric J. ;
Arumugam, Manimozhiyan ;
Asnicar, Francesco ;
Bai, Yang ;
Bisanz, Jordan E. ;
Bittinger, Kyle ;
Brejnrod, Asker ;
Brislawn, Colin J. ;
Brown, C. Titus ;
Callahan, Benjamin J. ;
Caraballo-Rodriguez, Andres Mauricio ;
Chase, John ;
Cope, Emily K. ;
Da Silva, Ricardo ;
Diener, Christian ;
Dorrestein, Pieter C. ;
Douglas, Gavin M. ;
Durall, Daniel M. ;
Duvallet, Claire ;
Edwardson, Christian F. ;
Ernst, Madeleine ;
Estaki, Mehrbod ;
Fouquier, Jennifer ;
Gauglitz, Julia M. ;
Gibbons, Sean M. ;
Gibson, Deanna L. ;
Gonzalez, Antonio ;
Gorlick, Kestrel ;
Guo, Jiarong ;
Hillmann, Benjamin ;
Holmes, Susan ;
Holste, Hannes ;
Huttenhower, Curtis ;
Huttley, Gavin A. ;
Janssen, Stefan ;
Jarmusch, Alan K. ;
Jiang, Lingjing ;
Kaehler, Benjamin D. ;
Bin Kang, Kyo ;
Keefe, Christopher R. ;
Keim, Paul ;
Kelley, Scott T. ;
Knights, Dan .
NATURE BIOTECHNOLOGY, 2019, 37 (08) :852-857
[9]  
Callahan BJ, 2016, NAT METHODS, V13, P581, DOI [10.1038/nmeth.3869, 10.1038/NMETH.3869]
[10]   Estimating the number of species in a Stochastic abundance model [J].
Chao, A ;
Bunge, J .
BIOMETRICS, 2002, 58 (03) :531-539