Hit-to-Lead Optimization of Heterocyclic Carbonyloxycarboximidamides as Selective Antagonists at Human Adenosine A3 Receptor

被引:0
作者
Huang, Xianglin [1 ]
Chorianopoulou, Anna [2 ]
Kalkounou, Panagoula [2 ]
Georgiou, Maria [2 ]
Pousias, Athanasios [2 ]
Davies, Amy [1 ]
Pearce, Abigail [1 ]
Harris, Matthew [1 ]
Lambrinidis, George [2 ]
Marakos, Panagiotis [2 ]
Pouli, Nicole [2 ]
Kolocouris, Antonios [2 ]
Lougiakis, Nikolaos [2 ]
Ladds, Graham [1 ]
机构
[1] Univ Cambridge, Dept Pharmacol, Cambridge CB2 1PD, England
[2] Natl & Kapodistrian Univ Athens, Sch Hlth Sci, Dept Pharm, Lab Med Chem,Sect Pharmaceut Chem, Panepistimiopolis Zografou, Athens 15771, Greece
基金
英国生物技术与生命科学研究理事会;
关键词
MOLECULAR-DYNAMICS; BINDING AFFINITIES; BIOLOGICAL EVALUATION; PROTEIN; PARAMETERS; DISCOVERY; DESIGN; LIGAND; INTEGRATION; PROTOCOLS;
D O I
10.1021/acs.jmedchem.4c01092
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
Antagonism of the human adenosine A(3) receptor (hA(3)R) has potential therapeutic application. Alchemical relative binding free energy calculations of K18 and K32 suggested that the combination of a 3-(2,6-dichlorophenyl)-isoxazolyl group with 2-pyridinyl at the ends of a carbonyloxycarboximidamide group should improve hA(3)R affinity. Of the 25 new analogues synthesized, 37 and 74 showed improved hA(3)R affinity compared to K18 (and K32). This was further improved through the addition of a bromine group to the 2-pyridinyl at the 5-position, generating compound 39. Alchemical relative binding free energy calculations, mutagenesis studies and MD simulations supported the compounds' binding pattern while suggesting that the bromine of 39 inserts deep into the hA(3)R orthosteric pocket, so highlighting the importance of rigidification of the carbonyloxycarboximidamide moiety. MD simulations highlighted the importance of rigidification of the carbonyloxycarboximidamide, while suggesting that the bromine of 39 inserts deep into the hA(3)R orthosteric pocket, which was supported through mutagenesis studies 39 also selectively antagonized endogenously expressed hA(3)R in nonsmall cell lung carcinoma cells, while pharmacokinetic studies indicated low toxicity enabling in vivo evaluation. We therefore suggest that 39 has potential for further development as a high-affinity hA(3)R antagonist.
引用
收藏
页码:13117 / 13146
页数:30
相关论文
共 104 条
  • [1] Interactions between RAMP2 and CRF receptors: The effect of receptor subtypes, splice variants and cell context
    Bailey, Sian
    Harris, Matthew
    Barkan, Kerry
    Winfield, Ian
    Harper, Matthew Thomas
    Simms, John
    Ladds, Graham
    Wheatley, Mark
    Poyner, David
    [J]. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES, 2019, 1861 (05): : 997 - 1003
  • [2] Ballesteros J. A., 1995, METH NEUROSCI, V25, P366, DOI DOI 10.1016/S1043-9471(05)80049-7
  • [3] ANALYSIS AND REFINEMENT OF CRITERIA FOR PREDICTING THE STRUCTURE AND RELATIVE ORIENTATIONS OF TRANSMEMBRANAL HELICAL DOMAINS
    BALLESTEROS, JA
    WEINSTEIN, H
    [J]. BIOPHYSICAL JOURNAL, 1992, 62 (01) : 107 - 109
  • [4] Development and validation of a 96-well equilibrium dialysis apparatus for measuring plasma protein binding
    Banker, MJ
    Clark, TH
    Williams, JA
    [J]. JOURNAL OF PHARMACEUTICAL SCIENCES, 2003, 92 (05) : 967 - 974
  • [5] Medicinal Chemistry of A3 Adenosine Receptor Modulators: Pharmacological Activities and Therapeutic Implications
    Baraldi, Pier Giovanni
    Preti, Delia
    Borea, Pier Andrea
    Varani, Katia
    [J]. JOURNAL OF MEDICINAL CHEMISTRY, 2012, 55 (12) : 5676 - 5703
  • [6] Pharmacological characterisation of novel adenosine A3 receptor antagonists
    Barkan, Kerry
    Lagarias, Panagiotis
    Stampelou, Margarita
    Stamatis, Dimitrios
    Hoare, Sam
    Safitri, Dewi
    Klotz, Karl-Norbert
    Vrontaki, Eleni
    Kolocouris, Antonios
    Ladds, Graham
    [J]. SCIENTIFIC REPORTS, 2020, 10 (01)
  • [7] A WELL-BEHAVED ELECTROSTATIC POTENTIAL BASED METHOD USING CHARGE RESTRAINTS FOR DERIVING ATOMIC CHARGES - THE RESP MODEL
    BAYLY, CI
    CIEPLAK, P
    CORNELL, WD
    KOLLMAN, PA
    [J]. JOURNAL OF PHYSICAL CHEMISTRY, 1993, 97 (40) : 10269 - 10280
  • [8] MOLECULAR-DYNAMICS WITH COUPLING TO AN EXTERNAL BATH
    BERENDSEN, HJC
    POSTMA, JPM
    VANGUNSTEREN, WF
    DINOLA, A
    HAAK, JR
    [J]. JOURNAL OF CHEMICAL PHYSICS, 1984, 81 (08) : 3684 - 3690
  • [9] The A3 Adenosine Receptor: History and Perspectives
    Borea, Pier Andrea
    Varani, Katia
    Vincenzi, Fabrizio
    Baraldi, Pier Giovanni
    Tabrizi, Mojgan Aghazadeh
    Merighi, Stefania
    Gessi, Stefania
    [J]. PHARMACOLOGICAL REVIEWS, 2015, 67 (01) : 74 - 102
  • [10] ProLIF: a library to encode molecular interactions as fingerprints
    Bouysset, Cedric
    Fiorucci, Sebastien
    [J]. JOURNAL OF CHEMINFORMATICS, 2021, 13 (01)