A Comprehensive Bioinformatic Analysis Identifies a Tumor Suppressor Landscape of the MEG3 lncRNA in Breast Cancer

被引:1
作者
Ahmadi, Alireza [1 ]
Rezaei, Abedeh [1 ]
Khalaj-Kondori, Mohammad [1 ]
Khajehdehi, Mina [1 ]
机构
[1] Univ Tabriz, Fac Nat Sci, Dept Anim Biol, Tabriz, Iran
关键词
Breast cancer; lncRNA; MEG3; Tumor suppressor; Bioinformatics analysis; NONCODING RNA MEG3; ENDOPLASMIC-RETICULUM STRESS; DOWN-REGULATION; CELLS; MIGRATION; INVASION; PROLIFERATION; EXPRESSION; PATHWAY; GROWTH;
D O I
10.1007/s13193-024-01992-0
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Breast cancer (BC) is the leading cause of cancer mortality in women and a major risk to world health. Therefore, effective strategies are required for prompt diagnosis and treatment. Nowadays, non-coding RNAs (ncRNAs), particularly long ncRNAs (lncRNAs), have assumed a significant role in the prognosis and diagnosis of diseases, including cancer. In the present study, surveying the bioinformatic tools, including the lncRNADisease v2.0, OncoDB, InteractiVenn, GEPIA, RAID, COXPRESdb, DAVID v6.8, GEO2R, and LncSEA, we proposed the Maternally Expressed Gene (MEG3) as a potential biomarker in BC. This lncRNA significantly downregulates in BC and is associated with tumor size, metastasis, and pathological stage. MEG3 expression is downregulated in several types of primary human cancers and tumor cell lines, which raises the possibility that it could act as a tumor suppressor. The results suggest that MEG3 may play a crucial role in fundamental pathways, including apoptosis, and interact with essential genes and proteins such as P53. It may also be associated with the prognosis, proliferation, migration, invasion, and metastasis of BC.
引用
收藏
页码:752 / 761
页数:10
相关论文
共 53 条
[1]   Association analyses of a genetic variant in long non-coding RNA MEG3 with breast cancer susceptibility and serum MEG3 expression level in the Egyptian population [J].
Ali, Marwa A. ;
Shaker, Olfat G. ;
Alazrak, Mohammed ;
AbdelHafez, Marwa N. ;
Khalefa, Abeer A. ;
Hemeda, Nada F. ;
Abdelmoktader, Abdelrahman ;
Ahmed, Fatma A. .
CANCER BIOMARKERS, 2020, 28 (01) :49-63
[2]   Current and future burden of breast cancer: Global statistics for 2020 and 2040 [J].
Arnold, Melina ;
Morgan, Eileen ;
Rumgay, Harriet ;
Mafra, Allini ;
Singh, Deependra ;
Laversanne, Mathieu ;
Vignat, Jerome ;
Gralow, Julie R. ;
Cardoso, Fatima ;
Siesling, Sabine ;
Soerjomataram, Isabelle .
BREAST, 2022, 66 :15-23
[3]   Spotlight on Exosomal Non-Coding RNAs in Breast Cancer: An In Silico Analysis to Identify Potential lncRNA/circRNA-miRNA-Target Axis [J].
Ashekyan, Ohanes ;
Abdallah, Samira ;
Al Shoukari, Ayman ;
Chamandi, Ghada ;
Choubassy, Hayat ;
Itani, Abdul Rahman S. ;
Alwan, Nisreen ;
Nasr, Rihab .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 23 (15)
[4]   Long Non-Coding RNAs in Multiple Myeloma [J].
Butova, Romana ;
Vychytilova-Faltejskova, Petra ;
Souckova, Adela ;
Sevcikova, Sabina ;
Hajek, Roman .
NON-CODING RNA, 2019, 5 (01)
[5]   Clinical Value of lncRNA MEG3 in High-Grade Serous Ovarian Cancer [J].
Buttarelli, Marianna ;
De Donato, Marta ;
Raspaglio, Giuseppina ;
Babini, Gabriele ;
Ciucci, Alessandra ;
Martinelli, Enrica ;
Baccaro, Pina ;
Pasciuto, Tina ;
Fagotti, Anna ;
Scambia, Giovanni ;
Gallo, Daniela .
CANCERS, 2020, 12 (04)
[6]   Emerging roles of long non-coding RNA in cancer [J].
Calle, Anna Sanchez ;
Kawamura, Yumi ;
Yamamoto, Yusuke ;
Takeshita, Fumitaka ;
Ochiya, Takahiro .
CANCER SCIENCE, 2018, 109 (07) :2093-2100
[7]   Involvement of endoplasmic reticulum stress and p53 in lncRNA MEG3-induced human hepatoma HepG2 cell apoptosis [J].
Chen, Rui-Pei ;
Huang, Zhen-Lun ;
Liu, Li-Xuan ;
Xiang, Meng-Qi ;
Li, Guo-Ping ;
Feng, Jia-Lin ;
Liu, Bin ;
Wu, Ling-Fei .
ONCOLOGY REPORTS, 2016, 36 (03) :1649-1657
[8]   Mining Prognostic Significance of MEG3 in Human Breast Cancer Using Bioinformatics Analysis [J].
Cui, Xiangrong ;
Yi, Qin ;
Jing, Xuan ;
Huang, Yue ;
Tian, Jie ;
Long, Chunlan ;
Xiang, Zhongping ;
Liu, Jianping ;
Zhang, Chunmin ;
Tan, Bin ;
Li, Yasha ;
Zhu, Jing .
CELLULAR PHYSIOLOGY AND BIOCHEMISTRY, 2018, 50 (01) :41-51
[9]   The long noncoding RNA Meg3 regulates myoblast plasticity and muscle regeneration through epithelial-mesenchymal transition [J].
Dill, Tiffany L. ;
Carroll, Alina ;
Pinheiro, Amanda ;
Gao, Jiachen ;
Naya, Francisco J. .
DEVELOPMENT, 2021, 148 (02)
[10]   Downregulation of long non-coding RNA MEG3 promotes proliferation, migration, and invasion of human hepatocellular carcinoma cells by upregulating TGF-β1 [J].
Dong, Hui ;
Zhang, Yue ;
Xu, Yan ;
Ma, Ruixia ;
Liu, Liqiu ;
Luo, Congjuan ;
Jiang, Wei .
ACTA BIOCHIMICA ET BIOPHYSICA SINICA, 2019, 51 (06) :645-652