Novel drug targets and molecular mechanisms for sarcopenia based on systems biology

被引:3
|
作者
Ceyhan, Atakan Burak [1 ]
Ozcan, Mehmet [2 ]
Kim, Woonghee [3 ]
Li, Xiangyu [3 ]
Altay, Ozlem [3 ]
Zhang, Cheng [3 ]
Mardinoglu, Adil [1 ,3 ]
机构
[1] Kings Coll London, Fac Dent Oral & Craniofacial Sci, Ctr Host Microbiome Interact, London SE1 9RT, England
[2] Zonguldak Bulent Ecevit Univ, Fac Med, Dept Med Biochem, Zonguldak, Turkiye
[3] KTH Royal Inst Technol, Sci Life Lab, SE-17165 Stockholm, Sweden
关键词
System biology; Sarcopenia; Co-expression network analysis; Differential expression analysis; Drug repurposing; Translational medicine; DISEASE TYPE-III; AGL GENE; MUTATIONS; HETEROGENEITY; DATABASE;
D O I
10.1016/j.biopha.2024.116920
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Sarcopenia is a major public health concern among older adults, leading to disabilities, falls, fractures, and mortality. This study aimed to elucidate the pathophysiological mechanisms of sarcopenia and identify potential therapeutic targets using systems biology approaches. RNA-seq data from muscle biopsies of 24 sarcopenic and 29 healthy individuals from a previous cohort were analysed. Differential expression, gene set enrichment, gene co-expression network, and topology analyses were conducted to identify target genes implicated in sarcopenia pathogenesis, resulting in the selection of 6 hub genes (PDHX, AGL, SEMA6C, CASQ1, MYORG, and CCDC69). A drug repurposing approach was then employed to identify new pharmacological treatment options for sarcopenia (clofibric-acid, troglitazone, withaferin-a, palbociclib, MG-132, bortezomib). Finally, validation experiments in muscle cell line (C2C12) revealed MG-132 and troglitazone as promising candidates for sarcopenia treatment. Our approach, based on systems biology and drug repositioning, provides insight into the molecular mechanisms of sarcopenia and offers potential new treatment options using existing drugs.
引用
收藏
页数:10
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