RNA G-quadruplexes and stress: emerging mechanisms and functions

被引:20
作者
Kharel, Prakash [1 ,2 ]
Ivanov, Pavel [1 ,2 ,3 ]
机构
[1] Brigham & Womens Hosp, Dept Med, Div Rheumatol Inflammat & Immun, Boston, MA 02115 USA
[2] Harvard Med Sch, Boston, MA 02115 USA
[3] HMS Initiat RNA Med, Boston, MA 02115 USA
基金
美国国家卫生研究院;
关键词
GRANULE FORMATION; HELICASE DHX36; IN-VITRO; BINDING; TRANSLATION; CANCER; CELLS;
D O I
10.1016/j.tcb.2024.01.005
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
RNA G-quadruplexes (rG4s) are noncanonical secondary structures formed by guanine-rich sequences that are found in different regions of RNA molecules. These structures have been implicated in diverse biological processes, including translation, splicing, and RNA stability. Recent studies have suggested that rG4s play a role in the cellular response to stress. This review summarizes the current knowledge on rG4s under stress, focusing on their formation, regulation, and potential functions in stress response pathways. We discuss the molecular mechanisms that regulate the formation of rG4 under different stress conditions and the impact of these structures on RNA metabolism, gene expression, and cell survival. Finally, we highlight the potential therapeutic implications of targeting rG4s for the treatment of stress-related diseases through modulating cell survival.
引用
收藏
页码:771 / 784
页数:14
相关论文
共 82 条
[21]   HELIX FORMATION BY GUANYLIC ACID [J].
GELLERT, M ;
LIPSETT, MN ;
DAVIES, DR .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1962, 48 (12) :2013-&
[22]   Genome-wide ribosome profiling reveals complex translational regulation in response to oxidative stress [J].
Gerashchenko, Maxim V. ;
Lobanov, Alexei V. ;
Gladyshev, Vadim N. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (43) :17394-17399
[23]   Identification of G-quadruplex structures in MALAT1 lncRNA that interact with nucleolin and nucleophosmin [J].
Ghosh, Arpita ;
Pandey, Satya Prakash ;
Joshi, Dheeraj Chandra ;
Rana, Priya ;
Ansari, Asgar Hussain ;
Sundar, Jennifer Seematti ;
Singh, Praveen ;
Khan, Yasmeen ;
Ekka, Mary Krishna ;
Chakraborty, Debojyoti ;
Maiti, Souvik .
NUCLEIC ACIDS RESEARCH, 2023, 51 (17) :9415-9431
[24]   Stress and the nonsense-mediated RNA decay pathway [J].
Goetz, Alexandra E. ;
Wilkinson, Miles .
CELLULAR AND MOLECULAR LIFE SCIENCES, 2017, 74 (19) :3509-3531
[25]   RNA G-quadruplexes are globally unfolded in eukaryotic cells and depleted in bacteria [J].
Guo, Junjie U. ;
Bartel, David P. .
SCIENCE, 2016, 353 (6306)
[26]   G3BP1 binds to guanine quadruplexes in mRNAs to modulate their stabilities [J].
He, Xiaomei ;
Yuan, Jun ;
Wang, Yinsheng .
NUCLEIC ACIDS RESEARCH, 2021, 49 (19) :11323-11336
[27]   Analysis of NRAS RNA G-quadruplex binding proteins reveals DDX3X as a novel interactor of cellular G-quadruplex containing transcripts [J].
Herdy, Barbara ;
Mayer, Clemens ;
Varshney, Dhaval ;
Marsico, Giovanni ;
Murat, Pierre ;
Taylor, Chris ;
D'Santos, Clive ;
Tannahill, David ;
Balasubramanian, Shankar .
NUCLEIC ACIDS RESEARCH, 2018, 46 (21) :11592-11604
[28]   hnRNP H/F drive RNA G-quadruplex-mediated translation linked to genomic instability and therapy resistance in glioblastoma [J].
Herviou, Pauline ;
Le Bras, Morgane ;
Dumas, Leila ;
Hieblot, Corinne ;
Gilhodes, Julia ;
Cioci, Gianluca ;
Hugnot, Jean-Philippe ;
Ameadan, Alfred ;
Guillonneau, Francois ;
Dassi, Erik ;
Cammas, Anne ;
Millevoi, Stefania .
NATURE COMMUNICATIONS, 2020, 11 (01)
[29]   G-quadruplexes: the beginning and end of UTRs [J].
Huppert, Julian Leon ;
Bugaut, Anthony ;
Kumari, Sunita ;
Balasubramanian, Shankar .
NUCLEIC ACIDS RESEARCH, 2008, 36 (19) :6260-6268
[30]   G-quadruplex structures contribute to the neuroprotective effects of angiogenin-induced tRNA fragments [J].
Ivanov, Pavel ;
O'Day, Elizabeth ;
Emara, Mohamed M. ;
Wagner, Gerhard ;
Lieberman, Judy ;
Anderson, Paul .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 111 (51) :18201-18206