Prognostic prediction of ovarian cancer based on hierarchical sampling & fine-grained recognition convolution neural network

被引:2
作者
Liao, Xin [1 ,2 ,3 ]
Li, Kang [2 ]
Gan, Zongyuan [5 ]
Pu, Yuxin [5 ,6 ]
Qian, Guangwu [2 ,7 ]
Zheng, Xin [4 ,5 ]
机构
[1] Sichuan Univ, West China Univ Hosp 2, Pathol Dept, Chengdu 610041, Sichuan, Peoples R China
[2] Sichuan Univ, West China Hosp, West China Biomed Big Data Ctr, Chengdu 610041, Sichuan, Peoples R China
[3] Sichuan Univ, Key Lab Birth Defects & Related Dis Women & Childr, Minist Educ, Chengdu 610041, Sichuan, Peoples R China
[4] Sichuan Univ Arts & Sci, Sch Artificial Intelligence & Big data, Dazhou 635000, Sichuan, Peoples R China
[5] DICOM Stand Natl & Local Collaborated Engn Lab, Chengdu 611731, Sichuan, Peoples R China
[6] Univ Elect Sci & Technol China, Sch Comp Sci & Engn, Chengdu 611731, Sichuan, Peoples R China
[7] Sichuan Univ, Pittsburgh Inst, Chengdu 610207, Peoples R China
关键词
Ovarian high-grade serous adenocarcinoma; Prognostic analysis; Histopathology whole -slide images; Two -stage hierarchical sampling; Fine-grained image recognition; CLASSIFICATION; FEATURES; SEGMENTATION; IMAGES;
D O I
10.1016/j.aej.2024.05.079
中图分类号
T [工业技术];
学科分类号
08 ;
摘要
Ovarian cancer ranks among the deadliest gynecological malignancies, with high-grade serous adenocarcinoma (HGSA) constituting 75 % of ovarian cancer cases and accounting for 80 % -90 % of ovarian cancer -related fatalities. Accurate prognosis prediction for ovarian HGSA is of critical clinical significance. However, existing prognostic analysis methods exhibit suboptimal performance in identifying prognostically relevant pathological markers, making it challenging, even for experienced pathologists, to forecast the prognosis of ovarian HGSA patients accurately. Deep learning holds promise in enhancing prognostic prediction accuracy. However, a significant challenge in this field arises from the impracticality of directly inputting histopathology whole -slide images with millions to billions of pixels into existing deep learning networks for training and inference. To address this issue, we propose a prognostic analysis network for ovarian cancer based on hierarchical sampling and fine-grained recognition. This network comprises a two -stage hierarchical sampling sub -network, a finegrained image recognition sub -network, and a prognostic analysis sub -network. We assess the system 's performance using a pathological dataset of 450 cases of ovarian HGSA diagnosed and treated at the Pathology Department of the West China Second University Hospital of Sichuan University. Results indicate that: (1) The proposed prognostic analysis network based on two -stage hierarchical sampling sub -network can effectively analyze the histopathology whole -slide image; (2) the use of fine-grained image recognition and the introduction of clinical information can improve the performance of HGSA prognosis analysis method, with an improvement range of 4.77 -10.66%; and (3) the proposed method can be used for the model analysis of pathological datasets of HGSA. Moreover, this method can be used to explore effective characteristics from the multi -modal dataset through automatic learning with prediction recall, accuracy, and precision rates of 80.0%, 81.1%, and 81.8%, respectively, underscoring its clinical potential. This study reveals the reliability and effectiveness of the proposed prognosis evaluation method of HGCA. Conclusions can help clinicians precisely evaluate the recurrence risk of patients, take the initiative to master the diagnosis and treatment, and increase the long-term survival rate of patients.
引用
收藏
页码:264 / 278
页数:15
相关论文
共 48 条
[1]   Multi-modal advanced deep learning architectures for breast cancer survival prediction [J].
Arya, Nikhilanand ;
Saha, Sriparna .
KNOWLEDGE-BASED SYSTEMS, 2021, 221
[2]   Current state of biomarkers in ovarian cancer prognosis [J].
Au, Katrina K. ;
Josahkian, Juliana A. ;
Francis, Julie-Ann ;
Squire, Jeremy A. ;
Koti, Madhuri .
FUTURE ONCOLOGY, 2015, 11 (23) :3187-3195
[3]   Computational image features of immune architecture is associated with clinical benefit and survival in gynecological cancers across treatment modalities [J].
Azarianpour, Sepideh ;
Corredor, German ;
Bera, Kaustav ;
Leo, Patrick ;
Fu, Pingfu ;
Toro, Paula ;
Joehlin-Price, Amy ;
Mokhtari, Mojgan ;
Mahdi, Haider ;
Madabhushi, Anant .
JOURNAL FOR IMMUNOTHERAPY OF CANCER, 2022, 10 (02)
[4]   Histological patterns and intra-tumor heterogeneity as prognostication tools in high grade serous ovarian cancers [J].
Azzalini, Eros ;
Barbazza, Renzo ;
Stanta, Giorgio ;
Giorda, Giorgio ;
Bortot, Lucia ;
Bartoletti, Michele ;
Puglisi, Fabio ;
Canzonieri, Vincenzo ;
Bonin, Serena .
GYNECOLOGIC ONCOLOGY, 2021, 163 (03) :498-505
[5]   Colon cancer prediction on histological images using deep learning features and Bayesian optimized SVM [J].
Babu, Tina ;
Singh, Tripty ;
Gupta, Deepa ;
Hameed, Shahin .
JOURNAL OF INTELLIGENT & FUZZY SYSTEMS, 2021, 41 (05) :5275-5286
[6]   Genomic profiling of platinum-resistant ovarian cancer: The road into druggable targets [J].
Balieiro Anastacio da Costa, Alexandre Andre ;
Baiocchi, Glauco .
SEMINARS IN CANCER BIOLOGY, 2021, 77 :29-41
[7]   Automated Nuclear Segmentation in Head and Neck Squamous Cell Carcinoma Pathology Reveals Relationships between Cytometric Features and ESTIMATE Stromal and Immune Scores [J].
Blocker, Stephanie J. ;
Cook, James ;
Everitt, Jeffrey I. ;
Austin, Wyatt M. ;
Watts, Tammara L. ;
Mowery, Yvonne M. .
AMERICAN JOURNAL OF PATHOLOGY, 2022, 192 (09) :1305-1320
[8]   Vision-based Autonomous Vehicle Recognition: A New Challenge for Deep Learning-based Systems [J].
Boukerche, Azzedine ;
Ma, Xiren .
ACM COMPUTING SURVEYS, 2021, 54 (04)
[9]   Rethinking ovarian cancer II: reducing mortality from high-grade serous ovarian cancer [J].
Bowtell, David D. ;
Boehm, Steffen ;
Ahmed, Ahmed A. ;
Aspuria, Paul-Joseph ;
Bast, Robert C., Jr. ;
Beral, Valerie ;
Berek, Jonathan S. ;
Birrer, Michael J. ;
Blagden, Sarah ;
Bookman, Michael A. ;
Brenton, James D. ;
Chiappinelli, Katherine B. ;
Martins, Filipe Correia ;
Coukos, George ;
Drapkin, Ronny ;
Edmondson, Richard ;
Fotopoulou, Christina ;
Gabra, Hani ;
Galon, Jerome ;
Gourley, Charlie ;
Heong, Valerie ;
Huntsman, David G. ;
Iwanicki, Marcin ;
Karlan, Beth Y. ;
Kaye, Allyson ;
Lengyel, Ernst ;
Levine, Douglas A. ;
Lu, Karen H. ;
McNeish, Iain A. ;
Menon, Usha ;
Narod, Steven A. ;
Nelson, Brad H. ;
Nephew, Kenneth P. ;
Pharoah, Paul ;
Powell, Daniel J., Jr. ;
Ramos, Pilar ;
Romero, Iris L. ;
Scott, Clare L. ;
Sood, Anil K. ;
Stronach, Euan A. ;
Balkwill, Frances R. .
NATURE REVIEWS CANCER, 2015, 15 (11) :668-679
[10]   Machine learning applications to neuroimaging for glioma detection and classification: An artificial intelligence augmented systematic review [J].
Buchlak, Quinlan D. ;
Esmaili, Nazanin ;
Leveque, Jean-Christophe ;
Bennett, Christine ;
Farrokhi, Farrokh ;
Piccardi, Massimo .
JOURNAL OF CLINICAL NEUROSCIENCE, 2021, 89 :177-198