Historic obstacles and emerging opportunities in the field of developmental metabolism - lessons from Heidelberg

被引:0
作者
Garfinkel, Alexandra M. [1 ,2 ]
Ilker, Efe [3 ]
Miyazawa, Hidenobu [4 ]
Schmeisser, Kathrin [5 ]
Tennessen, Jason M. [6 ]
机构
[1] Yale Univ, Sch Med, Dept Pediat & Genet, Pediat Genom Discovery Program, New Haven, CT USA
[2] Yale Univ, Dept Internal Med, Sect Endocrinol, New Haven, CT 06510 USA
[3] Max Planck Inst Phys Komplexer Syst, D-01187 Dresden, Germany
[4] European Mol Biol Lab, Dev Biol Unit, D-69117 Heidelberg, Germany
[5] Max Planck Inst Mol Cell Biol & Genet, D-01307 Dresden, Germany
[6] Indiana Univ, Dept Biol, Bloomington, IN 47405 USA
来源
DEVELOPMENT | 2024年 / 151卷 / 12期
基金
欧洲研究理事会; 日本学术振兴会; 美国国家卫生研究院;
关键词
Developmental metabolism; Spatial metabolomics; FRET sensors; Theoretical modeling; Metabolic set-points; Metabolic diseases; CELL-CYCLE; GLUCOSE-METABOLISM; INBORN-ERRORS; GROWTH; OSCILLATIONS; EMBRYO; DIFFERENTIATION; LOCALIZATION; METABOLOMICS; ALTERNATIVES;
D O I
10.1242/dev.202937
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
The field of developmental metabolism is experiencing a technological revolution that is opening entirely new fields of inquiry. Advances in metabolomics, small-molecule sensors, single-cell RNA sequencing and computational modeling present new opportunities for exploring cell-specific and tissue-specific metabolic networks, interorgan metabolic communication, and gene-by-metabolite interactions in time and space. Together, these advances not only present a means by which developmental biologists can tackle questions that have challenged the field for centuries, but also present young scientists with opportunities to define new areas of inquiry. These emerging frontiers of developmental metabolism were at the center of a highly interactive 2023 EMBO workshop 'Developmental metabolism: flows of energy, matter, and information'. Here, we summarize key discussions from this forum, emphasizing modern developmental biology's challenges and opportunities.
引用
收藏
页数:7
相关论文
共 115 条
  • [1] Metabolic differentiation in the embryonic retina
    Agathocleous, Michalis
    Love, Nicola K.
    Randlett, Owen
    Harris, Julia J.
    Liu, Jinyue
    Murray, Andrew J.
    Harris, William A.
    [J]. NATURE CELL BIOLOGY, 2012, 14 (08) : 859 - U180
  • [2] Aleksander SA, 2024, GENETICS, V227, DOI 10.1093/genetics/iyae049
  • [3] Spatial metabolomics: from a niche field towards a driver of innovation
    Alexandrov, Theodore
    [J]. NATURE METABOLISM, 2023, 5 (09) : 1443 - 1445
  • [4] Integrated, Step-Wise, Mass-Isotopomeric Flux Analysis of the TCA Cycle
    Alves, Tiago C.
    Pongratz, Rebecca L.
    Zhao, Xiaojian
    Yarborough, Orlando
    Sereda, Sam
    Shirihai, Orian
    Cline, Gary W.
    Mason, Graeme
    Kibbey, Richard G.
    [J]. CELL METABOLISM, 2015, 22 (05) : 936 - 947
  • [5] Dissecting Flux Balances to Measure Energetic Costs in Cell Biology: Techniques and Challenges
    Arunachalam, Easun
    Ireland, William
    Yang, Xingbo
    Needleman, Daniel
    [J]. ANNUAL REVIEW OF CONDENSED MATTER PHYSICS, 2023, 14 : 211 - 235
  • [6] Circuit Theory for Chemical Reaction Networks
    Avanzini, Francesco
    Freitas, Nahuel
    Esposito, Massimiliano
    [J]. PHYSICAL REVIEW X, 2023, 13 (02)
  • [7] Size and form in efficient transportation networks
    Banavar, JR
    Maritan, A
    Rinaldo, A
    [J]. NATURE, 1999, 399 (6732) : 130 - 132
  • [8] Overflow metabolism in Escherichia coli results from efficient proteome allocation
    Basan, Markus
    Hui, Sheng
    Okano, Hiroyuki
    Zhang, Zhongge
    Shen, Yang
    Williamson, James R.
    Hwa, Terence
    [J]. NATURE, 2015, 528 (7580) : 99 - +
  • [9] Beadle GW, 1936, GENETICS, V21, P225
  • [10] Metaboverse enables automated discovery and visualization of diverse metabolic regulatory patterns
    Berg, Jordan A.
    Zhou, Youjia
    Ouyang, Yeyun
    Cluntun, Ahmad A.
    Waller, T. Cameron
    Conway, Megan E.
    Nowinski, Sara M.
    Van Ry, Tyler
    George, Ian
    Cox, James E.
    Wang, Bei
    Rutter, Jared
    [J]. NATURE CELL BIOLOGY, 2023, 25 (4) : 616 - 625