DDX21 mediates co-transcriptional RNA m 6 A modification to promote transcription termination and genome stability

被引:14
|
作者
Hao, Jin-Dong [1 ,2 ]
Liu, Qian-Lan [1 ,2 ]
Liu, Meng-Xia [1 ,2 ,3 ]
Yang, Xing [1 ,2 ,6 ,7 ]
Wang, Liu -Ming [1 ,2 ]
Su, Si-Yi [1 ,2 ,4 ]
Xiao, Wen [1 ,2 ]
Zhang, Meng-Qi [1 ,2 ]
Zhang, Yi-Chang [1 ,2 ,8 ]
Zhang, Lan [1 ,2 ,3 ]
Chen, Yu-Sheng [1 ,2 ,5 ]
Yang, Yun-Gui [1 ,2 ,5 ]
Ren, Jie [1 ,2 ,3 ,4 ,5 ]
机构
[1] Chinese Acad Sci, Beijing Inst Genom, China Natl Ctr Bioinformat, Key Lab RNA Sci & Engn, Beijing 100101, Peoples R China
[2] Univ Chinese Acad Sci, Beijing 100049, Peoples R China
[3] Univ Chinese Acad Sci, Sino Danish Coll, Beijing 101408, Peoples R China
[4] Univ Chinese Acad Sci, Sch Future Technol, Beijing 100049, Peoples R China
[5] Chinese Acad Sci, Inst Stem Cell & Regenerat, Beijing 100101, Peoples R China
[6] Boston Childrens Hosp, Stem Cell Program, Div Hematol Oncol, Boston, MA 02115 USA
[7] Harvard Med Sch, Dept Biol Chem & Mol Pharmacol, Boston, MA 02115 USA
[8] Univ Copenhagen, Dept Food Sci, Sect Microbiol & Fermentat, Frederiksberg, Denmark
基金
中国国家自然科学基金;
关键词
MESSENGER-RNA; R-LOOP; POLYMERASE-II; CONVERGENT GENES; READ ALIGNMENT; REVEALS; N-6-METHYLADENOSINE; HELICASE; TRANSLATION; METHYLATION;
D O I
10.1016/j.molcel.2024.03.006
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
N6-methyladenosine (m 6 A) is a crucial RNA modification that regulates diverse biological processes in human cells, but its co -transcriptional deposition and functions remain poorly understood. Here, we identified the RNA helicase DDX21 with a previously unrecognized role in directing m 6 A modification on nascent RNA for co -transcriptional regulation. DDX21 interacts with METTL3 for co -recruitment to chromatin through its recognition of R -loops, which can be formed co -transcriptionally as nascent transcripts hybridize onto the template DNA strand. Moreover, DDX21's helicase activity is needed for METTL3-mediated m 6 A deposition onto nascent RNA following recruitment. At transcription termination regions, this nexus of actions promotes XRN2-mediated termination of RNAPII transcription. Disruption of any of these steps, including the loss of DDX21, METTL3, or their enzymatic activities, leads to defective termination that can induce DNA damage. Therefore, we propose that the R-loop-DDX21-METTL3 nexus forges the missing link for co -transcriptional modification of m 6 A, coordinating transcription termination and genome stability.
引用
收藏
页码:1711 / 1726.e11
页数:28
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