Complete mitochondrial genome of the Minois paupera Alphéraky, 1888 (nymphalidae: satyrinae) and its phylogenetic analysis

被引:0
作者
Hu, Wenqian [1 ]
Mao, Kangshan [1 ]
Dou, Liang [1 ]
机构
[1] Sichuan Univ, Coll Life Sci, Key Lab Conservat Biol Endangered Wildlife Sichuan, Key Lab Bioresources & Ecoenvironm,Minist Educ, Chengdu, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2024年 / 9卷 / 06期
关键词
Satyrinae; Minois paupera; mitochondrial genome; phylogeny; SEQUENCE; ALGORITHM;
D O I
10.1080/23802359.2024.2361704
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The present study firstly reported a complete mitochondrial genome of Minois paupera (Alph & eacute;raky, 1888), a Satyrinae species endemic to China. This mitogenome is circular, 15,213 bp in length, and consists of 37 typical mitochondrial genes, including 13 protein-coding genes (PCGs), 22 tRNAs, and two rRNAs. The phylogenetic position was inferred using 31 previously published complete mitogenomes, and the results reveal that M. paupera is the most closely related to Minois dryas. The complete mitogenome of M. paupera provides useful genetic information for further research on the phylogeography and phylogeny of the genus Minois.
引用
收藏
页码:738 / 742
页数:5
相关论文
共 26 条
[1]  
[Anonymous], 2010, Afr J Biotechnol, V9, P735, DOI [10.5897/AJB09.1486, DOI 10.5897/AJB09.1486]
[2]   SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing [J].
Bankevich, Anton ;
Nurk, Sergey ;
Antipov, Dmitry ;
Gurevich, Alexey A. ;
Dvorkin, Mikhail ;
Kulikov, Alexander S. ;
Lesin, Valery M. ;
Nikolenko, Sergey I. ;
Son Pham ;
Prjibelski, Andrey D. ;
Pyshkin, Alexey V. ;
Sirotkin, Alexander V. ;
Vyahhi, Nikolay ;
Tesler, Glenn ;
Alekseyev, Max A. ;
Pevzner, Pavel A. .
JOURNAL OF COMPUTATIONAL BIOLOGY, 2012, 19 (05) :455-477
[3]   GeneWise and genomewise [J].
Birney, E ;
Clamp, M ;
Durbin, R .
GENOME RESEARCH, 2004, 14 (05) :988-995
[4]   Ultrafast Approximation for Phylogenetic Bootstrap [J].
Bui Quang Minh ;
Minh Anh Thi Nguyen ;
von Haeseler, Arndt .
MOLECULAR BIOLOGY AND EVOLUTION, 2013, 30 (05) :1188-1195
[5]   trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses [J].
Capella-Gutierrez, Salvador ;
Silla-Martinez, Jose M. ;
Gabaldon, Toni .
BIOINFORMATICS, 2009, 25 (15) :1972-1973
[6]   Complete mitochondrial genome of a satyrid butterfly, Ninguta schrenkii (Lepidoptera: Nymphalidae) [J].
Fan, Cheng ;
Xu, Chang ;
Li, Jialian ;
Lei, Ying ;
Gao, Yuan ;
Xu, Chongren ;
Wang, Rongjiang .
MITOCHONDRIAL DNA PART A, 2016, 27 (01) :80-81
[7]   Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads-a baiting and iterative mapping approach [J].
Hahn, Christoph ;
Bachmann, Lutz ;
Chevreux, Bastien .
NUCLEIC ACIDS RESEARCH, 2013, 41 (13) :e129
[8]   The complete mitochondrial genome of Melanargia asiatica (Lepidoptera: Nymphalidae: Satyrinae) [J].
Huang, Dunyuan ;
Hao, Jiasheng ;
Zhang, Wei ;
Su, Tianjuan ;
Wang, Ying ;
Xu, Xiaofeng .
MITOCHONDRIAL DNA PART A, 2016, 27 (02) :806-808
[9]   Improved systematic tRNA gene annotation allows new insights into the evolution of mitochondrial tRNA structures and into the mechanisms of mitochondrial genome rearrangements [J].
Juehling, Frank ;
Puetz, Joern ;
Bernt, Matthias ;
Donath, Alexander ;
Middendorf, Martin ;
Florentz, Catherine ;
Stadler, Peter F. .
NUCLEIC ACIDS RESEARCH, 2012, 40 (07) :2833-2845
[10]  
Kalyaanamoorthy S, 2017, NAT METHODS, V14, P587, DOI [10.1038/NMETH.4285, 10.1038/nmeth.4285]