Advances in Quantification and Site Stoichiometry Analysis Methods for Phosphorylated Proteins

被引:0
作者
Liu, Yuan [1 ,2 ]
Zhai, Rui [1 ,2 ]
Wu, Fan
Chu, Zhan-Ying [1 ,2 ]
Zhao, Yang [1 ,2 ]
Dai, Xin-Hua [1 ,2 ]
Fang, Xiang [1 ,2 ]
Yu, Xiao-Ping [1 ]
机构
[1] China Jiliang Univ, Coll Life Sci, Zhejiang Prov Key Lab Biometrol & Inspection & Qua, Hangzhou 310018, Peoples R China
[2] Chinese Acad Metrol, Natl Market Supervis Technol Innovat Ctr Mass Spec, Frontier Metrol Sci Ctr, Beijing 100029, Peoples R China
基金
中国国家自然科学基金;
关键词
Phosphorylated protein; Enrichment process; Mass spectrometry; Quantitative approach; Stoichiometry; Review; MASS-SPECTROMETRY; QUANTITATIVE PHOSPHOPROTEOMICS; ABSOLUTE QUANTITATION; ELECTRON-TRANSFER; CELL; DISSOCIATION; PEPTIDE; STRATEGY; FRAGMENTATION; LOCALIZATION;
D O I
10.19756/j.issn.0253-3820.231219
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
The post -translational modification of proteins is a key mechanism that imparts physiological functions to proteins, among which reversible phosphorylation modifications play a pivotal role in many biological processes. Aberrant changes in phosphorylation are often closely associated with various major disease processes. In recent years, with the aid of proteomic technologies and methods, high -throughput, high -precision qualitative and quantitative approaches for phosphorylated proteins have rapidly advanced. This article reviews the research progress of phosphorylated protein quantification and chemical proteomics analysis methods based on the "bottomup" strategy, including phosphopeptide enrichment methods, mass spectrometry fragmentation methods, quantification analysis methods and phosphorylation site stoichiometry, and discusses the development trend of quantification and stoichiometric analysis methods for phosphorylated proteins.
引用
收藏
页码:609 / 623
页数:15
相关论文
共 50 条
  • [21] Analysis of proteins and peptides by electromigration methods in microchips
    Stepanova, Sille
    Kasicka, Vaclav
    JOURNAL OF SEPARATION SCIENCE, 2017, 40 (01) : 228 - 250
  • [22] Mass Spectral Library Methods for Analysis of Site-Specific N-Glycosylation: Application to Human Milk Proteins
    Remoroza, Concepcion A.
    Burke, Meghan C.
    Yang, Xiaoyu
    Sheetlin, Sergey
    Mirokhin, Yuri
    Markey, Sanford P.
    V. Tchekhovskoi, Dmitrii
    Stein, Stephen E.
    JOURNAL OF PROTEOME RESEARCH, 2022, 21 (10) : 2421 - 2434
  • [23] Top-Down Analysis of Supercharged Proteins Using Collision-, Electron-, and Photon-Based Activation Methods
    Juetten, Kyle J.
    Brodbelt, Jennifer S.
    JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 2023, 34 (07) : 1467 - 1476
  • [24] Advanced methods for the analysis of chromatin-associated proteins
    Guillen-Ahlers, Hector
    Shortreed, Michael R.
    Smith, Lloyd M.
    Olivier, Michael
    PHYSIOLOGICAL GENOMICS, 2014, 46 (13) : 441 - 447
  • [25] Recent progress of chemical methods for lysine site-selective modification of peptides and proteins
    Li, Jian
    Chen, Jinjin
    Hu, Qi-Long
    Wang, Zhen
    Xiong, Xiao-Feng
    CHINESE CHEMICAL LETTERS, 2025, 36 (05)
  • [26] Analysis of nitrated proteins and tryptic peptides by HPLC-chip-MS/MS: site-specific quantification, nitration degree, and reactivity of tyrosine residues
    Zhang, Yingyi
    Yang, Hong
    Poeschl, Ulrich
    ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2011, 399 (01) : 459 - 471
  • [27] Carbohydrates on Proteins: Site-Specific Glycosylation Analysis by Mass Spectrometry
    Zhu, Zhikai
    Desaire, Heather
    ANNUAL REVIEW OF ANALYTICAL CHEMISTRY, VOL 8, 2015, 8 : 463 - 483
  • [28] Advances and applications of in-tube solid-phase microextraction for analysis of proteins
    Xu, Liang
    Hu, Zhan-Song
    Duan, Rui
    Wang, Xuan
    Yang, Yuan-Shuo
    Dong, Lin-Yi
    Wang, Xian-Hua
    JOURNAL OF CHROMATOGRAPHY A, 2021, 1640
  • [29] A Quantitative Chemical Proteomics Approach for Site-specific Stoichiometry Analysis of Ubiquitination
    Li, Yunan
    Evers, Jonathan
    Luo, Ang
    Erber, Luke
    Postler, Zachary
    Chen, Yue
    ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2019, 58 (02) : 537 - 541
  • [30] Analysis of the serine/threonine/tyrosine phosphoproteome of the pathogenic bacterium Listeria monocytogenes reveals phosphorylated proteins related to virulence
    Misra, Sandeep K.
    Milohanic, Eliane
    Ake, Francine
    Mijakovic, Ivan
    Deutscher, Josef
    Monnet, Veronique
    Henry, Celine
    PROTEOMICS, 2011, 11 (21) : 4155 - 4165