Apirhabdus apintestini gen. nov., sp. nov., a member of a novel genus of the family Enterobacteriaceae , isolated from the gut of the western honey bee Apis mellifera

被引:0
作者
Quinn, Matthew W. [1 ]
Daisley, Brendan A. [1 ,2 ]
Vancuren, Sarah J. [1 ]
Bouchema, Amira [1 ]
Nino, Elina [3 ,4 ]
Reid, Gregor [5 ]
Thompson, Graham J. [2 ]
Allen-Vercoe, Emma [1 ]
机构
[1] Univ Guelph, Dept Mol & Cellular Biol, Guelph, ON N1G 2W1, Canada
[2] Western Univ, Dept Biol, London, ON N6A 5C1, Canada
[3] Univ Calif Davis, Dept Entomol & Nematol, Davis, CA 95616 USA
[4] Univ Calif Agr & Nat Resources, Oakland, CA 95618 USA
[5] Western Univ, Dept Microbiol & Immunol, London, ON N6A 5B7, Canada
基金
加拿大健康研究院;
关键词
Apirhabdus apintestini; Apis mellifera; CA-0114; T; Enterobacteriaceae; SALMONELLA-ENTERICA; VARROA-DESTRUCTOR; GENOME; VIRULENCE; MENINGITIS; AEROBACTIN; PHYLOGENY; ACCURATE; SEQUENCE; WORKER;
D O I
10.1099/ijsem.0.006346
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram- negative, motile, rod- shaped bacterial strain, CA- 0114 T , was isolated from the midgut of a western honey bee, Apis mellifera . The isolate exhibited <= 96.43 % 16S rRNA gene sequence identity (1540 bp) to members of the families Enterobacteriaceae and Erwiniaceae . Phylogenetic trees based on genome BLAST distance phylogeny and concatenated protein sequences encoded by conserved genes atpD , fusA, gyrB , infB , leuS , pyrG and rpoB separated the isolate from other genera forming a distinct lineage in the Enterobacteriaceae . In both trees, the closest relatives were Tenebrionicola larvae YMB-R21 T and Tenebrionibacter intestinalis BIT-L3 T , which were isolated previously from Tenebrio molitor L., a plastic- eating mealworm. Digital DNA-DNA hybridization, orthologous average nucleotide identity and average amino acid identity values between strain CA - 0114 T and the closest related members within the Enterobacteriaceae were <= 23.1, 75.45 and 76.04 %, respectively. The complete genome of strain CA - 0114 T was 4 451669 bp with a G+C content of 52.12 mol%. Notably, the apparent inability of strain CA - 0114 T to ferment o- glucose, inositol and L- rhamnose in the API 20E system is unique among closely related members of the Enterobacteriaceae . Based on the results obtained through genotypic and phenotypic analysis, we propose that strain CA - 0114 T represents a novel species and genus within the family Enterobacteriaceae , for which we propose the name Apirhabdus apintestini gen. nov., sp. nov. (type strain CA-0114 T =ATCC TSD-396 T =DSM 116385 T ).
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页数:13
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