The genomic route to tomato breeding: Past, present, and future

被引:10
作者
Wang, Yan [1 ]
Sun, Chuanlong [2 ,3 ]
Ye, Zhibiao [4 ]
Li, Chuanyou [2 ,5 ]
Huang, Sanwen [6 ,7 ]
Lin, Tao [1 ]
机构
[1] China Agr Univ, Coll Hort, Beijing Key Lab Growth & Dev Regulat Protected Veg, Beijing 100193, Peoples R China
[2] Chinese Acad Sci, Inst Genet & Dev Biol, Natl Ctr Plant Gene Res Beijing, State Key Lab Plant Genom, Beijing 100101, Peoples R China
[3] Shandong Agr Univ, Coll Hort Sci & Engn, Tai An 271018, Peoples R China
[4] Huazhong Agr Univ, Natl Key Lab Germplasm Innovat Utilizat Hort Crops, Wuhan 430070, Peoples R China
[5] Shandong Agr Univ, Coll Life Sci, Tai An 271018, Peoples R China
[6] Chinese Acad Agr Sci, Agr Genom Inst Shenzhen, Shenzhen Branch, Guangdong Lab Lingnan Modern Agr,State Key Lab Tro, Shenzhen 518120, Guangdong, Peoples R China
[7] Chinese Acad Trop Agr Sci, State Key Lab Trop Crop Breeding, Haikou 571101, Hainan, Peoples R China
基金
中国国家自然科学基金;
关键词
QUANTITATIVE TRAIT LOCUS; TRANSCRIPTION FACTOR; FRUIT SIZE; CROP IMPROVEMENT; SHAPED TOMATO; GENE; DOMESTICATION; ACCUMULATION; EVOLUTION; PROTEIN;
D O I
10.1093/plphys/kiae248
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Over the past 10,000 years, tomato species have undergone both unintentional and intentional selection to enhance their favorable traits for human consumption and manufacturing. These selection processes have significantly influenced the genomes of tomato species and have played a critical role in improving tomato varieties. In this review, we summarize recent advances in tomato genome sequencing, explore the impact of human-driven selection, and recapitulate key genes associated with important agronomic traits in tomato breeding. We provide several examples of genomics-guided tomato breeding to highlight the potential of genome resources in facilitating tomato improvement. Furthermore, we elaborate the progress and strategies of tomato breeding through genome design and present how such efforts can help future enhancements of tomato to align with the demands of sustainability and evolving human societies.
引用
收藏
页码:2500 / 2514
页数:15
相关论文
共 168 条
  • [91] Fruit weight is controlled by Cell Size Regulator encoding a novel protein that is expressed in maturing tomato fruits
    Mu, Qi
    Huang, Zejun
    Chakrabarti, Manohar
    Illa-Berenguer, Eudald
    Liu, Xiaoxi
    Wang, Yanping
    Ramos, Alexis
    van der Knaap, Esther
    [J]. PLOS GENETICS, 2017, 13 (08):
  • [92] Overexpression of petunia chalcone isomerase in tomato results in fruit containing increased levels of flavonols
    Muir, SR
    Collins, GJ
    Robinson, S
    Hughes, S
    Bovy, A
    De Vos, CHR
    van Tunen, AJ
    Verhoeyen, ME
    [J]. NATURE BIOTECHNOLOGY, 2001, 19 (05) : 470 - 474
  • [93] Increase in Tomato Locule Number Is Controlled by Two Single-Nucleotide Polymorphisms Located Near WUSCHEL
    Munos, Stephane
    Ranc, Nicolas
    Botton, Emmanuel
    Berard, Aurelie
    Rolland, Sophie
    Duffe, Philippe
    Carretero, Yolande
    Le Paslier, Marie-Christine
    Delalande, Corinne
    Bouzayen, Mondher
    Brunel, Dominique
    Causse, Mathilde
    [J]. PLANT PHYSIOLOGY, 2011, 156 (04) : 2244 - 2254
  • [94] Optimization of crop productivity in tomato using induced mutations in the florigen pathway
    Park, Soon Ju
    Jiang, Ke
    Tal, Lior
    Yichie, Yoav
    Gar, Oron
    Zamir, Dani
    Eshed, Yuval
    Lippman, Zachary B.
    [J]. NATURE GENETICS, 2014, 46 (12) : 1337 - 1342
  • [95] Peralta I. E., 2008, Systematic Botany Monographs, V84
  • [96] Temporally extended gene expression of the ADP-Glc pyrophosphorylase large subunit (AgpL1) leads to increased enzyme activity in developing tomato fruit
    Petreikov, Marina
    Shen, Shmuel
    Yeselson, Yelena
    Levin, Ilan
    Bar, Moshe
    Schaffer, Arthur A.
    [J]. PLANTA, 2006, 224 (06) : 1465 - 1479
  • [97] Advancing crop genomics from lab to field
    Purugganan, Michael D.
    Jackson, Scott A.
    [J]. NATURE GENETICS, 2021, 53 (05) : 595 - +
  • [98] The Genome Sequence of the Wild Tomato Solanum pimpinellifolium Provides Insights Into Salinity Tolerance
    Razali, Rozaimi
    Bougouffa, Salim
    Morton, Mitchell J. L.
    Lightfoot, Damien J.
    Alam, Intikhab
    Essack, Magbubah
    Arold, Stefan T.
    Kamau, Allan A.
    Schmockel, Sandra M.
    Pailles, Yveline
    Shahid, Mohammed
    Michell, Craig T.
    Al-Babili, Salim
    Ho, Yung Shwen
    Tester, Mark
    Bajic, Vladimir B.
    Negrao, Sonia
    [J]. FRONTIERS IN PLANT SCIENCE, 2018, 9
  • [99] Genomic Evidence for Complex Domestication History of the Cultivated Tomato in Latin America
    Razifard, Hamid
    Ramos, Alexis
    Della Valle, Audrey L.
    Bodary, Cooper
    Goetz, Erika
    Manser, Elizabeth J.
    Li, Xiang
    Zhang, Lei
    Visa, Sofia
    Tieman, Denise
    van der Knaap, Esther
    Caicedo, Ana L.
    [J]. MOLECULAR BIOLOGY AND EVOLUTION, 2020, 37 (04) : 1118 - 1132
  • [100] Engineering Quantitative Trait Variation for Crop Improvement by Genome Editing
    Rodriguez-Leal, Daniel
    Lemmon, Zachary H.
    Man, Jarrett
    Bartlett, Madelaine E.
    Lippman, Zachary B.
    [J]. CELL, 2017, 171 (02) : 470 - +