Portable loop-mediated isothermal amplification device with spectrometric detection for rapid pathogen identification

被引:0
作者
Pan, Chun Yu [1 ]
Kijamnajsuk, Puchong [2 ]
Chen, Jyh Jian [1 ]
机构
[1] Natl Pingtung Univ Sci & Technol, Dept Biomechatron Engn, 1 Shuefu Rd, Pingtung 91201, Taiwan
[2] Kasetsart Univ, Dept Phys, 50 Ngamwongwan Rd, Bangkok 10900, Thailand
关键词
Infectious diseases; Portable testing platform; Loop -mediated isothermal amplification; (LAMP); Spectrometric detection; Salmonella typhimurium DNA; MICRODEVICE; VIRUS; CHIP;
D O I
10.1016/j.ab.2024.115615
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
With the rise in extreme weather due to global warming, coupled with globalization facilitating the spread of infectious diseases, there's a pressing need for portable testing platforms offering simplicity, low cost, and remote transmission, particularly beneficial in resource-limited and non-urban areas. We have developed a portable device using loop-mediated isothermal amplification (LAMP) with spectrometric detection to identify Salmonella Typhimurium DNA. The device utilizes the LinkIt 7697 microcontroller and a microspectrometer to capture and transmit spectral signals in real-time, allowing for improved monitoring and analysis of the reaction progress. We built a hand-held box containing a microspectrometer, thermoelectric cooler, ultraviolet LED, disposable reaction tube, and homemade thermal module, all powered by rechargeable batteries. Additionally, we conducted thorough experiments to ensure temperature accuracy within 1 degrees C under thermal control, developed a heating module with a LinkIt 7697 IoT development board to heat the DNA mixture to the reaction temperature within 3 min, and integrated foam insulation and a 3D-printed frame to enhance the device's thermal stability. We successfully demonstrated the amplification of Salmonella Typhimurium DNA with an impressive sensitivity of 2.83 x 10-4 ng/mu L. A remote webpage interface allows for monitoring the temperature and fluorescence during the LAMP process, improving usability. This portable LAMP device with real-time detection offers a cost-effective solution for detecting Salmonella Typhimurium in food products. Its unique design and capabilities make it a promising tool for ensuring food safety.
引用
收藏
页数:13
相关论文
共 36 条
  • [1] A CCD-based fluorescence imaging system for real-time loop-mediated isothermal amplification-based rapid and sensitive detection of waterborne pathogens on microchips
    Ahmad, Farhan
    Seyrig, Gregoire
    Tourlousse, Dieter M.
    Stedtfeld, Robert D.
    Tiedje, James M.
    Hashsham, Syed A.
    [J]. BIOMEDICAL MICRODEVICES, 2011, 13 (05) : 929 - 937
  • [2] Rapid isolation and detection of aquaculture pathogens in an integrated microfluidic system using loop-mediated isothermal amplification
    Chang, Wen-Hsin
    Yang, Sung-Yi
    Wang, Chih-Hung
    Tsai, Ming-An
    Wang, Pei-Chi
    Chen, Tzong-Yueh
    Chen, Shih-Chu
    Lee, Gwo-Bin
    [J]. SENSORS AND ACTUATORS B-CHEMICAL, 2013, 180 : 96 - 106
  • [3] Mobile Platform for Multiplexed Detection and Differentiation of Disease-Specific Nucleic Acid Sequences, Using Microfluidic Loop-Mediated Isothermal Amplification and Smartphone Detection
    Chen, Weili
    Yu, Hojeong
    Sun, Fu
    Ornob, Akid
    Brisbin, Ryan
    Ganguli, Anurup
    Vemuri, Vinay
    Strzebonski, Piotr
    Cui, Guangzhe
    Allen, Karen J.
    Desai, Smit A.
    Lin, Weiran
    Nash, David M.
    Hirschberg, David L.
    Brooks, Ian
    Bashir, Rashid
    Cunningham, Brian T.
    [J]. ANALYTICAL CHEMISTRY, 2017, 89 (21) : 11219 - 11226
  • [4] A polycarbonate based surface plasmon resonance sensing cartridge for high sensitivity HBV loop-mediated isothermal amplification
    Chuang, Tsung-Liang
    Wei, Shih-Chung
    Lee, Szu-Yuan
    Lin, Chii-Wann
    [J]. BIOSENSORS & BIOELECTRONICS, 2012, 32 (01) : 89 - 95
  • [5] On-chip parallel detection of foodborne pathogens using loop-mediated isothermal amplification
    Duarte, Carlos
    Salm, Eric
    Dorvel, Brian
    Reddy, Bobby, Jr.
    Bashir, Rashid
    [J]. BIOMEDICAL MICRODEVICES, 2013, 15 (05) : 821 - 830
  • [6] Predicting Viruses Accurately by a Multiplex Microfluidic Loop-Mediated Isothermal Amplification Chip
    Fang, Xueen
    Chen, Hui
    Yu, Shaoning
    Jiang, Xingyu
    Kong, Jilie
    [J]. ANALYTICAL CHEMISTRY, 2011, 83 (03) : 690 - 695
  • [7] Analysis of specific gene by integration of isothermal amplification and electrophoresis on poly(methyl methacrylate) microchips
    Hataoka, Y
    Zhang, LH
    Mori, Y
    Tomita, N
    Notomi, T
    Baba, Y
    [J]. ANALYTICAL CHEMISTRY, 2004, 76 (13) : 3689 - 3693
  • [8] Loop-mediated isothermal amplification for direct detection of Mycobacterium tuberculosis complex, M-avium, and M-intracellulare in sputum samples
    Iwamoto, T
    Sonobe, T
    Hayashi, K
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2003, 41 (06) : 2616 - 2622
  • [9] Integrated centrifugal reverse transcriptase loop-mediated isothermal amplification microdevice for influenza A virus detection
    Jung, Jae Hwan
    Park, Byung Hyun
    Oh, Seung Jun
    Choi, Goro
    Seo, Tae Seok
    [J]. BIOSENSORS & BIOELECTRONICS, 2015, 68 : 218 - 224
  • [10] A Simple, Inexpensive Device for Nucleic Acid Amplification without Electricity-Toward Instrument-Free Molecular Diagnostics in Low-Resource Settings
    LaBarre, Paul
    Hawkins, Kenneth R.
    Gerlach, Jay
    Wilmoth, Jared
    Beddoe, Andrew
    Singleton, Jered
    Boyle, David
    Weigl, Bernhard
    [J]. PLOS ONE, 2011, 6 (05):