Computer-aided colorectal cancer diagnosis: AI-driven image segmentation and classification

被引:2
作者
Erdas, Cagatay Berke [1 ]
机构
[1] Baskent Univ, Comp Engn, Ankara, Turkiye
关键词
Colorectal cancer; Computer-aided diagnosis; Histopathology; Image segmentation; Anomaly classi fi cation; Deep learning;
D O I
10.7717/peerj-cs.2071
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Colorectal cancer is an enormous health concern since it is among the most lethal types of malignancy. The manual examination has its limitations, including subjectivity and data overload. To overcome these challenges, computer -aided diagnostic systems focusing on image segmentation and abnormality classi fi cation have been developed. This study presents a two -stage approach for the automatic detection of fi ve types of colorectal abnormalities in addition to a control group: polyp, low-grade intraepithelial neoplasia, high-grade intraepithelial neoplasia, serrated adenoma, adenocarcinoma. In the fi rst stage, UNet3+ was used for image segmentation to locate the anomalies, while in the second stage, the Cross -Attention Multi -Scale Vision Transformer deep learning model was used to predict the type of anomaly after highlighting the anomaly on the raw images. In anomaly segmentation, UNet3+ achieved values of 0.9872, 0.9422, 0.9832, and 0.9560 for Dice Coef fi cient, Jaccard Index, Sensitivity, Speci fi city respectively. In anomaly detection, the Cross -Attention Multi -Scale Vision Transformer model attained a classi fi cation performance of 0.9340, 0.9037, 0.9446, 0.8723, 0.9102, 0.9849 for accuracy, F1 score, precision, recall, Matthews correlation coef fi cient, and speci fi city, respectively. The proposed approach proves its capacity to alleviate the overwhelm of pathologists and enhance the accuracy of colorectal cancer diagnosis by achieving high performance in both the identi fi cation of anomalies and the segmentation of regions.
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页数:18
相关论文
共 29 条
[1]   Deep learning for colon cancer histopathological images analysis [J].
Ben Hamida, A. ;
Devanne, M. ;
Weber, J. ;
Truntzer, C. ;
Derangere, V ;
Ghiringhelli, F. ;
Forestier, G. ;
Wemmert, C. .
COMPUTERS IN BIOLOGY AND MEDICINE, 2021, 136
[2]  
Bilal M, 2022, medRxiv, DOI [10.1101/2022.02.28.22271565, 10.1101/2022.02.28.22271565, DOI 10.1101/2022.02.28.22271565]
[3]   The Wonderful Colors of the Hematoxylin-Eosin Stain in Diagnostic Surgical Pathology [J].
Chan, John K. C. .
INTERNATIONAL JOURNAL OF SURGICAL PATHOLOGY, 2014, 22 (01) :12-32
[4]   CrossViT: Cross-Attention Multi-Scale Vision Transformer for Image Classification [J].
Chen, Chun-Fu ;
Fan, Quanfu ;
Panda, Rameswar .
2021 IEEE/CVF INTERNATIONAL CONFERENCE ON COMPUTER VISION (ICCV 2021), 2021, :347-356
[5]  
de Leon MP, 2001, DIGEST LIVER DIS, V33, P372
[6]   A fully automated approach involving neuroimaging and deep learning for Parkinson's disease detection and severity prediction [J].
Erdas, Cagatay Berke ;
Sumer, Emre .
PEERJ COMPUTER SCIENCE, 2023, 9 :1-11
[7]  
Fischer Andrew H, 2008, CSH Protoc, V2008, DOI 10.1101/pdb.prot4986
[8]   A high-level feature channel attention UNet network for cholangiocarcinoma segmentation from microscopy hyperspectral images [J].
Gao, Hongmin ;
Yang, Mengran ;
Cao, Xueying ;
Liu, Qin ;
Xu, Peipei .
MACHINE VISION AND APPLICATIONS, 2023, 34 (05)
[9]   Breast cancer detection from histopathology images using modified residual neural networks [J].
Gupta, Varun ;
Vasudev, Megha ;
Doegar, Amit ;
Sambyal, Nitigya .
BIOCYBERNETICS AND BIOMEDICAL ENGINEERING, 2021, 41 (04) :1272-1287
[10]  
Huang HM, 2020, INT CONF ACOUST SPEE, P1055, DOI [10.1109/ICASSP40776.2020.9053405, 10.1109/icassp40776.2020.9053405]