Ion mobility Mass Spectrometry for Glycomics: Challenges and Opportunities When Met with Artificial Intelligence

被引:1
作者
Zhu, Kai [1 ]
Wang, Wenkang [2 ]
Ye, Xingqian [1 ,3 ,4 ,5 ]
Chen, Shiguo [1 ,3 ,4 ,5 ]
机构
[1] Zhejiang Univ, Natl Local Joint Engn Lab Intelligent Food Technol, Zhejiang Key Lab Agrofood Proc,Integrated Res Base, Zhejiang Int Sci & Technol Cooperat Base Hlth Food, Hangzhou 310058, Peoples R China
[2] Zhejiang Univ, Coll Agr & Biotechnol, Hangzhou 310058, Peoples R China
[3] Zhejiang Univ, Zhongyuan Inst, Zhengzhou 450000, Peoples R China
[4] Zhejiang Univ, Ningbo Res Inst, Ningbo 315100, Peoples R China
[5] Zhejiang Univ, Innovat Ctr Yangtze River Delta, Jiaxing 314102, Peoples R China
关键词
Glycan; Structure; Ion mobility spectrometry; Ion mobility mass spectrometry; Collision cross section; Artificial intelligence; COLLISION CROSS-SECTION; GAS-PHASE BEHAVIOR; DRIFT-TUBE; STRUCTURAL-CHARACTERIZATION; INFRARED-SPECTROSCOPY; PLASMA CHROMATOGRAPHY; RESOLVING POWER; RESOLUTION; ISOMERS; IDENTIFICATION;
D O I
10.1016/j.trac.2024.117721
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
Glycans possess complex and unique stereochemical features, endowing them with distinguishing functions. An urgent need to develop a glycan sequencing method to elucidate the determine stereo diversity of glycan precisely. A currently promising approach is ion mobility mass spectrometry (IM -MS), which offers an additional dimension separation and collision cross section (CCS) value for the unambiguous identification of glycan isomers. This review highlights the evolution of IM -MS technologies to support comprehensive glycan analysis. Furthermore, the strategy and breakthroughs of glycan structure analysis based on IM -MS are discussed, and the CCS values of different glycans are summarized from relevant reports. We also envision the future of glycomics, including the development of glycan IM -MS library and the integration with artificial intelligence (AI) to truly unleash the capabilities of glycoscience. This review not only aims to provide a deeper understanding of IM -MS on glycan research but also discuss the road toward glycomics AI era.
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页数:13
相关论文
共 151 条
[1]  
Abikhodr AH, 2023, ANALYST, V148, P2277, DOI [10.1039/d3an00407d, 10.1039/D3AN00407D]
[2]   Identifying Mixtures of Isomeric Human Milk Oligosaccharides by the Decomposition of IR Spectral Fingerprints [J].
Abikhodr, Ali H. ;
Yatsyna, Vasyl ;
Ben Faleh, Ahmed ;
Warnke, Stephan ;
Rizzo, Thomas R. .
ANALYTICAL CHEMISTRY, 2021, 93 (44) :14730-14736
[3]   Analytical methods in untargeted metabolomics: state of the art in 2015 [J].
Alonso, Arnald ;
Marsal, Sara ;
Julia, Antonio .
FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY, 2015, 3
[4]   STRUCTURE ELUCIDATION OF NATIVE N- AND O-LINKED GLYCANS BY TANDEM MASS SPECTROMETRY (TUTORIAL) [J].
An, Hyun Joo ;
Lebrilla, Carlito B. .
MASS SPECTROMETRY REVIEWS, 2011, 30 (04) :560-578
[5]  
[Anonymous], 1988, Transport Properties of Ions in Gases, P325, DOI [10.1002/3527602852.ch6c, DOI 10.1002/3527602852.CH6C]
[6]   Multistage Ion Mobility Spectrometry Combined with Infrared Spectroscopy for Glycan Analysis [J].
Bansal, Priyanka ;
Ben Faleh, Ahmed ;
Warnke, Stephan ;
Rizzo, Thomas R. .
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 2023, 34 (04) :695-700
[7]   Identification of N-glycan positional isomers by combining IMS and vibrational fingerprinting of structurally determinant CID fragments [J].
Bansal, Priyanka ;
Ben Faleh, Ahmed ;
Warnke, Stephan ;
Rizzo, Thomas R. .
ANALYST, 2022, 147 (04) :704-711
[8]   Using SLIM-Based IMS-IMS Together with Cryogenic Infrared Spectroscopy for Glycan Analysis [J].
Bansal, Priyanka ;
Yatsyna, Vasyl ;
AbiKhodr, Ali H. ;
Warnke, Stephan ;
Ben Faleh, Ahmed ;
Yalovenko, Natalia ;
Wysocki, Vicki H. ;
Rizzo, Thomas R. .
ANALYTICAL CHEMISTRY, 2020, 92 (13) :9079-9085
[9]   MASS SPECTROGRAPHIC IDENTIFICATION OF ION OBSERVED IN HYDROGEN MOBILITY EXPERIMENTS [J].
BARNES, WS ;
MARTIN, DW ;
MCDANIEL, EW .
PHYSICAL REVIEW LETTERS, 1961, 6 (01) :110-&
[10]   Identification of Mobility-Resolved N-Glycan Isomers [J].
Ben Faleh, Ahmed ;
Warnke, Stephan ;
Bansal, Priyanka ;
Pellegrinelli, Robert P. ;
Dyukova, Irina ;
Rizzo, Thomas R. .
ANALYTICAL CHEMISTRY, 2022, 94 (28) :10101-10108